Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   AAYR27_RS14590 Genome accession   NZ_CP154912
Coordinates   2830607..2830987 (-) Length   126 a.a.
NCBI ID   WP_044335941.1    Uniprot ID   A0AAP7UKB4
Organism   Bacillus safensis strain FUA2118     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2825607..2835987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR27_RS14555 (AAYR27_14555) - 2826206..2826436 (-) 231 WP_024425132.1 DUF896 domain-containing protein -
  AAYR27_RS14560 (AAYR27_14560) - 2826506..2827153 (-) 648 WP_101677144.1 recombinase family protein -
  AAYR27_RS14565 (AAYR27_14565) yneA 2827171..2827482 (-) 312 WP_024425130.1 cell division suppressor protein YneA -
  AAYR27_RS14570 (AAYR27_14570) lexA 2827641..2828261 (+) 621 WP_101677145.1 transcriptional repressor LexA -
  AAYR27_RS14575 (AAYR27_14575) - 2828307..2828741 (-) 435 WP_101677146.1 hypothetical protein -
  AAYR27_RS14580 (AAYR27_14580) - 2829038..2829580 (+) 543 WP_041109224.1 IseA DL-endopeptidase inhibitor family protein -
  AAYR27_RS14585 (AAYR27_14585) - 2829613..2830461 (-) 849 WP_041117519.1 STAS domain-containing protein -
  AAYR27_RS14590 (AAYR27_14590) nucA/comI 2830607..2830987 (-) 381 WP_044335941.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AAYR27_RS14595 (AAYR27_14595) - 2831247..2832155 (-) 909 WP_024425124.1 trypsin-like serine protease -
  AAYR27_RS14600 (AAYR27_14600) - 2832349..2835492 (-) 3144 WP_305933654.1 bifunctional cytochrome P450/NADPH--P450 reductase -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13727.41 Da        Isoelectric Point: 8.5068

>NTDB_id=995257 AAYR27_RS14590 WP_044335941.1 2830607..2830987(-) (nucA/comI) [Bacillus safensis strain FUA2118]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=995257 AAYR27_RS14590 WP_044335941.1 2830607..2830987(-) (nucA/comI) [Bacillus safensis strain FUA2118]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTTGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTTAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGGCACCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548

Multiple sequence alignment