Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AAYR27_RS12165 Genome accession   NZ_CP154912
Coordinates   2365908..2366711 (+) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain FUA2118     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2360908..2371711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR27_RS12145 (AAYR27_12145) - 2360911..2361765 (+) 855 WP_101676879.1 TlyA family RNA methyltransferase -
  AAYR27_RS12150 (AAYR27_12150) argR 2361929..2362378 (+) 450 WP_024422938.1 transcriptional regulator ArgR -
  AAYR27_RS12155 (AAYR27_12155) recN 2362412..2364145 (+) 1734 WP_101676880.1 DNA repair protein RecN Machinery gene
  AAYR27_RS12160 (AAYR27_12160) spoIVB 2364345..2365622 (+) 1278 WP_034280268.1 SpoIVB peptidase -
  AAYR27_RS12165 (AAYR27_12165) spo0A 2365908..2366711 (+) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  AAYR27_RS12170 (AAYR27_12170) - 2367168..2368268 (+) 1101 WP_056767297.1 Rap family tetratricopeptide repeat protein -
  AAYR27_RS12175 (AAYR27_12175) - 2368496..2369233 (+) 738 WP_041117937.1 glycerophosphodiester phosphodiesterase -
  AAYR27_RS12180 (AAYR27_12180) - 2369270..2369506 (-) 237 WP_251232015.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=995255 AAYR27_RS12165 WP_024422935.1 2365908..2366711(+) (spo0A) [Bacillus safensis strain FUA2118]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=995255 AAYR27_RS12165 WP_024422935.1 2365908..2366711(+) (spo0A) [Bacillus safensis strain FUA2118]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGACATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAAATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCAATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAGGTCGCTTGGAGCAGAGGAAACATCGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGCGATTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884

Multiple sequence alignment