Detailed information NTG0995226

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAYR27_RS04240
• Genome accession: NZ_CP154912
• Coordinates: 838989..840101 (-)
• Length: 370 a.a.
• NCBI ID: WP_041105878.1
• Uniprot ID: A0AAP7UIW5
• Organism: Bacillus safensis strain FUA2118
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 833989..845101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR27_RS04225 (AAYR27_04225)	gyrA	834015..836519 (-)	2505	WP_034283649.1	DNA gyrase subunit A	-
AAYR27_RS04230 (AAYR27_04230)	gyrB	836752..838668 (-)	1917	WP_041118480.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AAYR27_RS04235 (AAYR27_04235)	-	838726..838971 (-)	246	WP_034283648.1	extracellular matrix/biofilm biosynthesis regulator RemA family protein	-
AAYR27_RS04240 (AAYR27_04240)	recF	838989..840101 (-)	1113	WP_041105878.1	DNA replication/repair protein RecF	Machinery gene
AAYR27_RS04245 (AAYR27_04245)	yaaA	840118..840333 (-)	216	WP_008360916.1	S4 domain-containing protein YaaA	-
AAYR27_RS04250 (AAYR27_04250)	dnaN	840484..841620 (-)	1137	WP_024424074.1	DNA polymerase III subunit beta	-
AAYR27_RS04255 (AAYR27_04255)	dnaA	841817..843157 (-)	1341	WP_024424073.1	chromosomal replication initiator protein DnaA	-
AAYR27_RS04260 (AAYR27_04260)	rpmH	843778..843912 (+)	135	WP_073208224.1	50S ribosomal protein L34	-
AAYR27_RS04265 (AAYR27_04265)	rnpA	843991..844350 (+)	360	WP_024427652.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42559.64 Da
• Isoelectric Point: 7.3663

>NTDB_id=995226 AAYR27_RS04240 WP_041105878.1 838989..840101(-) (recF) [Bacillus safensis strain FUA2118]
MYIQSLALTSYRNYEHTELQFDNKVNVMIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDQDYAKIEGRVIKKNGP
LPMQLVISKKGKKGKVNHIEQQKLSHYVGALNTIMFAPEDLSLVKGSPQIRRRFLDMEIGQVSAVYLHDLSLYQKILSQR
NHYLKQLQTRKQSDQAMLEILTEQLIDAAAKVVKRRLTFTKQLEKWAQPLHFGISRELETLTLQYQTAIEVSEASDLSKI
KNSYEESFQKLREREIDRGVTLWGPHRDDLLFFVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVEGIDHATLKEAEIFRVASGKVID

Nucleotide

• Length: 1113 bp

>NTDB_id=995226 AAYR27_RS04240 WP_041105878.1 838989..840101(-) (recF) [Bacillus safensis strain FUA2118]
ATGTACATTCAAAGTCTGGCGTTAACTTCATACCGAAACTATGAACACACCGAGCTTCAATTCGACAATAAGGTGAATGT
CATGATCGGTGAGAATGCCCAAGGCAAAACGAACTTGATGGAAGCGATCTATGTATTGTCGATGGCAAAGTCTCATCGTA
CGTCAAATGATAAAGAACTTATCCGATGGGACCAAGACTATGCTAAAATAGAAGGTAGAGTCATTAAAAAAAATGGTCCA
CTCCCAATGCAGCTCGTGATCTCAAAAAAAGGGAAAAAGGGCAAGGTCAATCACATTGAACAACAGAAGCTCAGTCATTA
TGTTGGTGCATTAAACACCATCATGTTTGCGCCAGAGGACTTAAGTCTTGTGAAGGGCAGCCCGCAAATCCGCAGAAGAT
TCCTCGACATGGAGATTGGACAAGTTTCTGCTGTCTACTTACATGATTTATCGCTCTATCAAAAAATCCTTTCTCAGCGG
AATCATTACTTGAAACAATTGCAGACAAGAAAGCAATCGGATCAAGCGATGCTGGAGATTTTAACAGAGCAGTTGATTGA
TGCGGCAGCGAAAGTGGTCAAAAGACGACTGACTTTTACGAAACAGCTCGAAAAATGGGCGCAGCCGCTGCATTTTGGGA
TTTCTAGAGAGCTAGAAACACTCACGCTCCAATACCAGACGGCAATAGAGGTATCAGAAGCGTCAGACTTGTCGAAAATA
AAGAATAGCTATGAAGAATCGTTTCAGAAACTAAGAGAGAGAGAAATAGACCGAGGGGTGACACTGTGGGGACCTCACAG
AGATGACCTGCTTTTCTTTGTGAATGGCCGGGATGTTCAGACATATGGCTCTCAAGGGCAGCAAAGAACAACAGCTCTTT
CACTAAAGCTGGCAGAAATTGATCTGATACATGAAGAAATCGGAGAATATCCTATTCTTCTACTTGATGATGTGTTATCT
GAACTTGATGATTACAGACAGTCTCATTTGCTCCATACCATTCAGGGGCGAGTACAGACCTTCGTCACCACAACAAGTGT
TGAAGGCATCGATCACGCCACCCTGAAAGAAGCGGAAATTTTCAGAGTAGCCAGTGGAAAAGTAATTGACTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	83.469	99.73	0.832