Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAYR28_RS06755 Genome accession   NZ_CP154909
Coordinates   1324949..1325521 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain FUA2117     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1319949..1330521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR28_RS06725 (AAYR28_06725) dapD 1320065..1320775 (+) 711 WP_070325769.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AAYR28_RS06730 (AAYR28_06730) - 1320857..1321987 (+) 1131 WP_120207133.1 N-acetyldiaminopimelate deacetylase -
  AAYR28_RS06735 (AAYR28_06735) - 1322038..1322280 (+) 243 WP_024424725.1 YkuS family protein -
  AAYR28_RS06740 (AAYR28_06740) - 1322303..1323112 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  AAYR28_RS06745 (AAYR28_06745) ahpA 1323384..1323926 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  AAYR28_RS06750 (AAYR28_06750) - 1324009..1324467 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  AAYR28_RS06755 (AAYR28_06755) rok 1324949..1325521 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  AAYR28_RS06760 (AAYR28_06760) - 1325569..1326486 (-) 918 WP_345808957.1 sigmaE regulated sporulation protein -
  AAYR28_RS06765 (AAYR28_06765) - 1326572..1327153 (+) 582 WP_125586281.1 molybdenum cofactor guanylyltransferase -
  AAYR28_RS06770 (AAYR28_06770) - 1327184..1328200 (+) 1017 WP_254001672.1 thiazole biosynthesis adenylyltransferase ThiF -
  AAYR28_RS06775 (AAYR28_06775) glp 1328210..1329487 (+) 1278 WP_034281604.1 gephyrin-like molybdotransferase Glp -
  AAYR28_RS06780 (AAYR28_06780) mobB 1329469..1329993 (+) 525 WP_081125261.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AAYR28_RS06785 (AAYR28_06785) - 1329990..1330481 (+) 492 WP_034281605.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=995181 AAYR28_RS06755 WP_024426871.1 1324949..1325521(+) (rok) [Bacillus safensis strain FUA2117]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=995181 AAYR28_RS06755 WP_024426871.1 1324949..1325521(+) (rok) [Bacillus safensis strain FUA2117]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAACTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment