Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   AAVD42_RS17450 Genome accession   NZ_CP154908
Coordinates   3232233..3232898 (+) Length   221 a.a.
NCBI ID   WP_345807271.1    Uniprot ID   -
Organism   Bacillus pumilus strain FUA2116     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3227233..3237898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVD42_RS17420 (AAVD42_17420) - 3227555..3228643 (+) 1089 WP_095117782.1 ABC transporter ATP-binding protein -
  AAVD42_RS17425 (AAVD42_17425) - 3228645..3229565 (+) 921 WP_106035866.1 ATP-binding cassette domain-containing protein -
  AAVD42_RS17430 (AAVD42_17430) - 3229672..3229959 (+) 288 WP_345807269.1 hypothetical protein -
  AAVD42_RS17435 (AAVD42_17435) - 3230097..3230675 (+) 579 WP_345807270.1 GNAT family N-acetyltransferase -
  AAVD42_RS17440 (AAVD42_17440) spxA 3230869..3231264 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  AAVD42_RS17445 (AAVD42_17445) - 3231305..3231970 (-) 666 WP_003211565.1 TerC family protein -
  AAVD42_RS17450 (AAVD42_17450) mecA 3232233..3232898 (+) 666 WP_345807271.1 adaptor protein MecA Regulator
  AAVD42_RS17455 (AAVD42_17455) cls 3232984..3234504 (+) 1521 WP_003212118.1 cardiolipin synthase -
  AAVD42_RS17460 (AAVD42_17460) - 3234666..3235826 (+) 1161 WP_345807272.1 competence protein CoiA family protein -
  AAVD42_RS17465 (AAVD42_17465) pepF 3236041..3237867 (+) 1827 WP_284906233.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26382.14 Da        Isoelectric Point: 3.9546

>NTDB_id=995147 AAVD42_RS17450 WP_345807271.1 3232233..3232898(+) (mecA) [Bacillus pumilus strain FUA2116]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKNQTDEESLDALLDDFQKEEQDQEDDNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=995147 AAVD42_RS17450 WP_345807271.1 3232233..3232898(+) (mecA) [Bacillus pumilus strain FUA2116]
ATGGAAATTGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCGCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAAATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACGATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATATGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774

Multiple sequence alignment