Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | AAVD42_RS17340 | Genome accession | NZ_CP154908 |
| Coordinates | 3210659..3211621 (+) | Length | 320 a.a. |
| NCBI ID | WP_065098861.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain FUA2116 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3205659..3216621
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVD42_RS17310 (AAVD42_17310) | argF | 3205987..3206937 (+) | 951 | WP_345807265.1 | ornithine carbamoyltransferase | - |
| AAVD42_RS17315 (AAVD42_17315) | - | 3207040..3207219 (+) | 180 | WP_003211282.1 | YjzC family protein | - |
| AAVD42_RS17320 (AAVD42_17320) | - | 3207389..3208654 (+) | 1266 | WP_345807266.1 | MFS transporter | - |
| AAVD42_RS17325 (AAVD42_17325) | - | 3208771..3208965 (-) | 195 | WP_003211779.1 | YjzD family protein | - |
| AAVD42_RS17330 (AAVD42_17330) | - | 3209177..3209917 (+) | 741 | WP_003211061.1 | hypothetical protein | - |
| AAVD42_RS17335 (AAVD42_17335) | - | 3209993..3210568 (+) | 576 | WP_268484149.1 | nad binding enzyme | - |
| AAVD42_RS17340 (AAVD42_17340) | med | 3210659..3211621 (+) | 963 | WP_065098861.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| AAVD42_RS17345 (AAVD42_17345) | comZ | 3211632..3211829 (+) | 198 | WP_003211983.1 | ComZ family protein | Regulator |
| AAVD42_RS17350 (AAVD42_17350) | - | 3211839..3212072 (-) | 234 | WP_226805013.1 | hypothetical protein | - |
| AAVD42_RS17355 (AAVD42_17355) | - | 3212242..3213180 (+) | 939 | WP_003212296.1 | beta-ketoacyl-ACP synthase III | - |
| AAVD42_RS17360 (AAVD42_17360) | fabF | 3213202..3214443 (+) | 1242 | WP_003211631.1 | beta-ketoacyl-ACP synthase II | - |
| AAVD42_RS17365 (AAVD42_17365) | - | 3214521..3215315 (+) | 795 | WP_044139924.1 | DUF2268 domain-containing protein | - |
| AAVD42_RS17370 (AAVD42_17370) | - | 3215486..3216466 (+) | 981 | WP_212046073.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35635.54 Da Isoelectric Point: 5.4531
>NTDB_id=995143 AAVD42_RS17340 WP_065098861.1 3210659..3211621(+) (med) [Bacillus pumilus strain FUA2116]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNIISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNAQGEYSFDFKEGVIEMGKFSSTIDRAFLKDIESDIASYKKTGKLPNEK
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNIISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNAQGEYSFDFKEGVIEMGKFSSTIDRAFLKDIESDIASYKKTGKLPNEK
Nucleotide
Download Length: 963 bp
>NTDB_id=995143 AAVD42_RS17340 WP_065098861.1 3210659..3211621(+) (med) [Bacillus pumilus strain FUA2116]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTGTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACATCATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTTGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTTGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGTGCAAAGTATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAACAGGGCGTAGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATAAAAGCCGATAATTTATCAGCGATCGGATATGTCACCGATCAATCT
AACCTCGGCAGTCATACTGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTATAGTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAATGCACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTTTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTGTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACATCATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTTGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTTGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGTGCAAAGTATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAACAGGGCGTAGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATAAAAGCCGATAATTTATCAGCGATCGGATATGTCACCGATCAATCT
AACCTCGGCAGTCATACTGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTATAGTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAATGCACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTTTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
63.259 |
97.813 |
0.619 |