Detailed information NTG0995001

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAVC22_RS10675
• Genome accession: NZ_CP154902
• Coordinates: 2134692..2135804 (-)
• Length: 370 a.a.
• NCBI ID: WP_003178089.1
• Uniprot ID: A0A415J9T0
• Organism: Bacillus paralicheniformis strain FUA2150
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2129692..2140804

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVC22_RS10660 (AAVC22_10660)	gyrA	2129794..2132268 (-)	2475	WP_043054015.1	DNA gyrase subunit A	-
AAVC22_RS10665 (AAVC22_10665)	gyrB	2132458..2134371 (-)	1914	WP_020449766.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AAVC22_RS10670 (AAVC22_10670)	-	2134432..2134674 (-)	243	WP_020449765.1	extracellular matrix/biofilm biosynthesis regulator RemA family protein	-
AAVC22_RS10675 (AAVC22_10675)	recF	2134692..2135804 (-)	1113	WP_003178089.1	DNA replication/repair protein RecF	Machinery gene
AAVC22_RS10680 (AAVC22_10680)	yaaA	2135821..2136036 (-)	216	WP_003178084.1	S4 domain-containing protein YaaA	-
AAVC22_RS10685 (AAVC22_10685)	dnaN	2136204..2137340 (-)	1137	WP_020449764.1	DNA polymerase III subunit beta	-
AAVC22_RS10690 (AAVC22_10690)	dnaA	2137518..2138858 (-)	1341	WP_009330034.1	chromosomal replication initiator protein DnaA	-
AAVC22_RS10695 (AAVC22_10695)	rpmH	2139498..2139632 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
AAVC22_RS10700 (AAVC22_10700)	rnpA	2139717..2140076 (+)	360	WP_020453656.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42482.33 Da
• Isoelectric Point: 6.7331

>NTDB_id=995001 AAVC22_RS10675 WP_003178089.1 2134692..2135804(-) (recF) [Bacillus paralicheniformis strain FUA2150]
MYIQNLTLSSYRNYERLDLQFENKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDKELIRWDEDYAKIEGRVIKKNGS
VPIQLVISKKGKKGKVNHIEQQKLSQYVGAVNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDQTMLDVLTEQLTEFAAKVVMKRLQFVDQLEKWAQPIHSGISRGLEELTLKYHTSLHVSDSPDLSKM
INSYQETFSKLRDKEIERGVSLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIQEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHKTLNEAEIFRVENGTLSD

Nucleotide

• Length: 1113 bp

>NTDB_id=995001 AAVC22_RS10675 WP_003178089.1 2134692..2135804(-) (recF) [Bacillus paralicheniformis strain FUA2150]
TTGTATATCCAAAATCTAACATTATCGTCTTACCGTAATTATGAACGCCTTGACCTTCAATTTGAGAACAAAGTGAACGT
GATTATCGGAGAGAACGCTCAAGGAAAAACGAATTTGATGGAAGCGATCTATGTGCTTGCGATGGCCAAATCCCATCGGA
CGTCAAATGATAAAGAACTCATACGATGGGATGAAGACTATGCTAAAATAGAAGGCAGGGTCATTAAAAAAAACGGTTCT
GTTCCCATTCAGCTCGTGATTTCCAAAAAAGGAAAAAAAGGTAAAGTTAATCATATTGAACAGCAGAAGCTGAGCCAGTA
TGTCGGGGCTGTCAACACGATTATGTTCGCGCCGGAGGATTTAAATCTTGTAAAAGGAAGTCCTCAGGTCAGAAGAAGGT
TTCTCGATATGGAAATCGGCCAAGTATCACCTGTCTATCTTCATGACCTTTCTCTTTACCAAAAAATCCTTTCACAACGG
AATCATTTCCTGAAACAGCTTCAAACGAGAAAGCAAACCGATCAAACGATGCTTGACGTGCTGACGGAACAGCTTACGGA
ATTCGCAGCAAAGGTTGTGATGAAACGGCTTCAGTTTGTCGATCAGCTTGAAAAATGGGCTCAGCCCATTCATTCCGGAA
TTTCAAGAGGTCTGGAAGAGCTGACGCTAAAGTATCATACGTCTCTTCACGTATCAGATTCGCCCGATTTGTCGAAAATG
ATCAATAGTTATCAAGAAACGTTTTCTAAATTAAGAGATAAAGAAATAGAACGGGGGGTATCTCTGTCAGGTCCCCACAG
GGATGATGTTCTCTTCTACGTCAATGGCCGTGATGTGCAGACTTACGGATCGCAGGGTCAGCAGCGAACGACTGCATTGT
CGCTTAAATTGGCTGAAATCGATTTGATTCAGGAAGAGATAGGAGAATACCCGATTTTGCTTTTGGATGATGTTTTATCA
GAGCTGGACGACTATCGGCAGTCTCACTTGCTCCACACCATTCAAGGCCGTGTTCAAACTTTCGTAACAACGACAAGCGT
TGATGGAATTGATCATAAAACCTTAAACGAAGCGGAAATCTTTCGAGTTGAAAATGGCACGCTATCGGACTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-346)

3D structure

• AlphaFold DB: A0A415J9T0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	89.13	99.459	0.886