Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   AAVC22_RS02750 Genome accession   NZ_CP154902
Coordinates   555186..555647 (+) Length   153 a.a.
NCBI ID   WP_020451191.1    Uniprot ID   A0A6I7TMU9
Organism   Bacillus paralicheniformis strain FUA2150     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 550186..560647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAVC22_RS02730 (AAVC22_02730) fadH 551211..551975 (-) 765 WP_020451195.1 2,4-dienoyl-CoA reductase -
  AAVC22_RS02735 (AAVC22_02735) - 552122..552979 (+) 858 WP_020451194.1 metallophosphoesterase -
  AAVC22_RS02740 (AAVC22_02740) - 553157..553654 (+) 498 WP_020451193.1 L,D-transpeptidase family protein -
  AAVC22_RS02745 (AAVC22_02745) - 553743..555044 (+) 1302 WP_020451192.1 MFS transporter -
  AAVC22_RS02750 (AAVC22_02750) kre 555186..555647 (+) 462 WP_020451191.1 YkyB family protein Regulator
  AAVC22_RS02755 (AAVC22_02755) - 555676..556593 (-) 918 WP_020451190.1 chemotaxis protein -
  AAVC22_RS02760 (AAVC22_02760) - 556667..557986 (-) 1320 WP_020451189.1 MFS transporter -
  AAVC22_RS02765 (AAVC22_02765) - 558083..558607 (-) 525 WP_020451188.1 RDD family protein -
  AAVC22_RS02770 (AAVC22_02770) - 558779..558937 (+) 159 WP_165583461.1 hypothetical protein -
  AAVC22_RS02775 (AAVC22_02775) - 559129..560298 (+) 1170 WP_020451186.1 aminotransferase A -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17573.37 Da        Isoelectric Point: 10.6730

>NTDB_id=994974 AAVC22_RS02750 WP_020451191.1 555186..555647(+) (kre) [Bacillus paralicheniformis strain FUA2150]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFASLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=994974 AAVC22_RS02750 WP_020451191.1 555186..555647(+) (kre) [Bacillus paralicheniformis strain FUA2150]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAATCGCCA
TGCAAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAGG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAGCCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATTAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCTGCCTCAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I7TMU9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83


Multiple sequence alignment