Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   AAYR26_RS20040 Genome accession   NZ_CP154901
Coordinates   3715779..3716732 (-) Length   317 a.a.
NCBI ID   WP_044790144.1    Uniprot ID   -
Organism   Bacillus licheniformis strain FUA2146     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3710779..3721732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR26_RS20010 (AAYR26_20015) - 3710882..3711856 (-) 975 WP_009328843.1 ABC transporter ATP-binding protein -
  AAYR26_RS20015 (AAYR26_20020) - 3712048..3712836 (-) 789 WP_009328844.1 DUF2268 domain-containing protein -
  AAYR26_RS20020 (AAYR26_20025) fabF 3712924..3714162 (-) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  AAYR26_RS20025 (AAYR26_20030) - 3714184..3715122 (-) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  AAYR26_RS20030 (AAYR26_20035) - 3715292..3715531 (+) 240 WP_069500393.1 hypothetical protein -
  AAYR26_RS20035 (AAYR26_20040) comZ 3715583..3715753 (-) 171 WP_031314537.1 ComZ family protein Regulator
  AAYR26_RS20040 (AAYR26_20045) med 3715779..3716732 (-) 954 WP_044790144.1 BMP family ABC transporter substrate-binding protein Regulator
  AAYR26_RS20045 (AAYR26_20050) - 3716819..3717394 (-) 576 WP_061576199.1 hypothetical protein -
  AAYR26_RS20050 (AAYR26_20055) - 3717481..3718215 (-) 735 WP_009328850.1 hypothetical protein -
  AAYR26_RS20055 (AAYR26_20060) - 3718447..3718641 (+) 195 WP_009328851.1 YjzD family protein -
  AAYR26_RS20060 (AAYR26_20065) - 3718713..3718892 (-) 180 WP_003180573.1 YjzC family protein -
  AAYR26_RS20065 (AAYR26_20070) - 3719074..3719886 (+) 813 WP_061576198.1 undecaprenyl-diphosphate phosphatase -
  AAYR26_RS20070 (AAYR26_20075) argF 3719920..3720870 (-) 951 WP_016885914.1 ornithine carbamoyltransferase -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35389.19 Da        Isoelectric Point: 4.7908

>NTDB_id=994957 AAYR26_RS20040 WP_044790144.1 3715779..3716732(-) (med) [Bacillus licheniformis strain FUA2146]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKAEHQNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFAEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQEGVIEMGKFSPVVDPSFQEEMKRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=994957 AAYR26_RS20040 WP_044790144.1 3715779..3716732(-) (med) [Bacillus licheniformis strain FUA2146]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAGTGATCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGATGTCTATTATAAAGAAGGAATCGATAATGACGCGGCTATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAATCTGATCTATGGGCACGGAAGCGAATACGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCCGATATTCATTTTGTTTTAATGAACTCTAAAGCCGAACACCAAAATGTGACAAGCATATCGCTTGAGGGAGAAGCGA
TGGGGTTTTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTGGAAGGGTTTGCCGAAGGGGCAAAATACCTCGATCCGGACATTGAGGTAATGACAGAATACGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCGATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGGTCCTTTGACATTCAAGAAGGCGTCATCGAGATGGGGAAATTCAGCCCTGTTGTCGATC
CGTCATTTCAAGAAGAGATGAAACGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

67.516

99.054

0.669


Multiple sequence alignment