Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAYR26_RS16350 Genome accession   NZ_CP154901
Coordinates   3026890..3027366 (-) Length   158 a.a.
NCBI ID   WP_003182174.1    Uniprot ID   A0A1Y0YPP5
Organism   Bacillus licheniformis strain FUA2146     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3021890..3032366
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAYR26_RS16310 (AAYR26_16320) - 3022014..3022448 (-) 435 WP_003182188.1 hypothetical protein -
  AAYR26_RS16315 (AAYR26_16325) - 3022632..3022988 (+) 357 WP_003182186.1 YxeA family protein -
  AAYR26_RS16320 (AAYR26_16330) speG 3023026..3023568 (-) 543 WP_003182184.1 spermidine N1-acetyltransferase -
  AAYR26_RS16325 (AAYR26_16335) - 3023597..3023914 (-) 318 WP_011198005.1 multidrug efflux SMR transporter -
  AAYR26_RS16330 (AAYR26_16340) - 3023914..3024249 (-) 336 WP_011198004.1 multidrug efflux SMR transporter -
  AAYR26_RS16335 (AAYR26_16345) - 3024331..3024915 (-) 585 WP_009328246.1 TetR family transcriptional regulator -
  AAYR26_RS16340 (AAYR26_16350) - 3025629..3026249 (+) 621 WP_003182178.1 hypothetical protein -
  AAYR26_RS16345 (AAYR26_16355) - 3026598..3026771 (-) 174 WP_003182176.1 hypothetical protein -
  AAYR26_RS16350 (AAYR26_16360) rok 3026890..3027366 (-) 477 WP_003182174.1 hypothetical protein Regulator
  AAYR26_RS16355 (AAYR26_16365) - 3027527..3028102 (-) 576 WP_003182172.1 GNAT family N-acetyltransferase -
  AAYR26_RS16360 (AAYR26_16370) - 3028136..3028615 (-) 480 WP_003182169.1 YdhH/YoaO family protein -
  AAYR26_RS16365 (AAYR26_16375) - 3028722..3029318 (-) 597 WP_003182167.1 class I SAM-dependent methyltransferase -
  AAYR26_RS16370 (AAYR26_16380) - 3029460..3029864 (-) 405 WP_223307095.1 hypothetical protein -
  AAYR26_RS16375 (AAYR26_16385) - 3029992..3030234 (-) 243 WP_003182164.1 hypothetical protein -
  AAYR26_RS16380 (AAYR26_16390) - 3030297..3031274 (-) 978 WP_003182162.1 alpha/beta hydrolase family protein -
  AAYR26_RS16385 (AAYR26_16395) - 3031507..3031809 (-) 303 WP_003182160.1 hypothetical protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18302.15 Da        Isoelectric Point: 10.1366

>NTDB_id=994940 AAYR26_RS16350 WP_003182174.1 3026890..3027366(-) (rok) [Bacillus licheniformis strain FUA2146]
MFNEREALRLRLEQLGDAEIQVMRELRKEREGIYSKLRELDRESEPAINKKSSLIDLASAAAEELKQSQHAADKHPPIKT
PSHTIFQSKTTIQREAAINILSRYEEGLKGIKLKTEIEKETGFPIKNMTTFMKSLMKHRPDIKKPARGHYILHKEKDL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=994940 AAYR26_RS16350 WP_003182174.1 3026890..3027366(-) (rok) [Bacillus licheniformis strain FUA2146]
ATGTTCAACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATCCAGGTGATGCGGGAATTGCG
AAAAGAACGAGAGGGCATTTATTCGAAGCTGCGTGAATTGGATCGGGAGAGTGAGCCTGCAATTAACAAAAAATCTTCAT
TAATCGACTTGGCAAGCGCTGCAGCAGAGGAATTAAAACAATCCCAGCATGCCGCTGACAAACATCCGCCTATCAAGACC
CCATCTCATACTATTTTCCAATCAAAAACAACCATACAGCGTGAGGCTGCCATAAACATTTTAAGCCGCTATGAAGAGGG
CTTGAAAGGCATTAAGCTCAAAACTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAACATGACGACATTTATGAAGA
GCTTAATGAAACATCGCCCAGATATTAAAAAGCCTGCCCGCGGCCATTATATTTTGCATAAAGAAAAAGACCTTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YPP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

45.055

100

0.519

Multiple sequence alignment