Detailed information NTG0994902

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAYR26_RS03525
• Genome accession: NZ_CP154901
• Coordinates: 614469..615581 (-)
• Length: 370 a.a.
• NCBI ID: WP_016885621.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain FUA2146
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 609469..620581

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR26_RS03510 (AAYR26_03515)	gyrA	609577..612045 (-)	2469	WP_003178095.1	DNA gyrase subunit A	-
AAYR26_RS03515 (AAYR26_03520)	gyrB	612236..614149 (-)	1914	WP_009330043.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AAYR26_RS03520 (AAYR26_03525)	-	614209..614451 (-)	243	WP_003178090.1	extracellular matrix/biofilm biosynthesis regulator RemA family protein	-
AAYR26_RS03525 (AAYR26_03530)	recF	614469..615581 (-)	1113	WP_016885621.1	DNA replication/repair protein RecF	Machinery gene
AAYR26_RS03530 (AAYR26_03535)	yaaA	615598..615813 (-)	216	WP_003178084.1	S4 domain-containing protein YaaA	-
AAYR26_RS03535 (AAYR26_03540)	dnaN	615981..617117 (-)	1137	WP_003178080.1	DNA polymerase III subunit beta	-
AAYR26_RS03540 (AAYR26_03545)	dnaA	617294..618634 (-)	1341	WP_009330034.1	chromosomal replication initiator protein DnaA	-
AAYR26_RS03545 (AAYR26_03550)	rpmH	619274..619408 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
AAYR26_RS03550 (AAYR26_03555)	rnpA	619493..619852 (+)	360	WP_003178055.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42482.33 Da
• Isoelectric Point: 6.7331

>NTDB_id=994902 AAYR26_RS03525 WP_016885621.1 614469..615581(-) (recF) [Bacillus licheniformis strain FUA2146]
MYIQNITLSSYRNYERLDLQFENKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDKELIRWDEDYAKIEGRVIKKNGS
VPIQLVISKKGKKGKVNHIEQQKLSQYVGAVNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDQTMLDVLTEQLTEFAAKVVMKRLQFVDQLEKWAQPIHSGISRGLEELTLKYHTSLHVSDSPDLSKM
INSYQETFSKLRDKEIERGVSLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIQEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHKTLNEAEIFRVENGTLSD

Nucleotide

• Length: 1113 bp

>NTDB_id=994902 AAYR26_RS03525 WP_016885621.1 614469..615581(-) (recF) [Bacillus licheniformis strain FUA2146]
TTGTATATCCAAAATATTACATTATCGTCTTACCGTAATTATGAGCGCCTTGACCTTCAATTTGAGAACAAAGTGAACGT
GATTATCGGAGAGAACGCTCAAGGAAAAACAAATTTGATGGAAGCGATCTATGTGCTTGCGATGGCGAAATCCCATCGGA
CGTCAAATGATAAAGAACTCATACGATGGGATGAAGACTATGCTAAAATAGAAGGCAGGGTCATTAAAAAAAACGGTTCT
GTTCCCATTCAGCTTGTGATTTCCAAAAAAGGAAAAAAAGGTAAAGTGAATCATATTGAACAGCAGAAGCTGAGCCAGTA
TGTCGGGGCTGTCAACACGATTATGTTCGCGCCGGAGGATTTAAATCTCGTAAAAGGAAGTCCTCAGGTCAGAAGAAGGT
TTCTCGACATGGAAATCGGCCAAGTATCACCTGTCTATCTTCATGACCTTTCTCTTTACCAAAAAATCCTTTCACAACGG
AATCATTTCTTGAAGCAGCTTCAAACGAGAAAGCAAACCGATCAAACGATGCTTGACGTGCTGACGGAACAGCTTACGGA
ATTCGCGGCAAAGGTTGTGATGAAACGGCTTCAGTTTGTCGATCAGCTTGAAAAATGGGCTCAGCCCATTCATTCCGGAA
TTTCAAGAGGTCTGGAAGAGCTGACGTTAAAGTATCATACGTCTCTTCACGTATCAGATTCGCCCGATTTGTCGAAAATG
ATCAATAGTTATCAAGAAACGTTTTCTAAATTAAGAGATAAAGAAATAGAACGGGGGGTATCTCTTTCAGGTCCCCACAG
GGATGATGTTCTTTTCTATGTCAATGGCCGTGATGTGCAGACTTACGGATCGCAGGGCCAGCAGCGCACGACTGCATTGT
CGCTTAAATTGGCTGAAATCGACTTGATTCAGGAAGAGATAGGAGAATACCCGATTCTGCTTTTGGATGATGTTTTATCA
GAGCTGGACGACTATCGGCAGTCTCACTTGCTCCACACCATTCAAGGCCGCGTTCAAACATTCGTAACAACGACAAGCGT
TGATGGAATTGATCATAAAACCTTAAACGAAGCGGAAATCTTTCGTGTTGAAAATGGCACGCTATCGGACTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-346)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	88.859	99.459	0.884