Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EW033_RS04125 Genome accession   NZ_LR130515
Coordinates   793348..794022 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain BPH2947 isolate BPH2947     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 788348..799022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW033_RS04095 - 788563..789630 (+) 1068 WP_000980134.1 membrane protein -
  EW033_RS04100 - 789781..790824 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  EW033_RS04110 - 791153..791581 (+) 429 WP_000198504.1 hypothetical protein -
  EW033_RS04115 - 791790..792296 (-) 507 WP_000940134.1 GNAT family N-acetyltransferase -
  EW033_RS04120 graX 792409..793332 (+) 924 WP_000802946.1 auxiliary protein GraX/ApsX -
  EW033_RS04125 braR 793348..794022 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  EW033_RS04130 graS 794015..795055 (+) 1041 WP_001061252.1 histidine kinase GraS/ApsS -
  EW033_RS04135 vraF 795199..795960 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  EW033_RS04140 vraG 795950..797839 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=994839 EW033_RS04125 WP_001166505.1 793348..794022(+) (braR) [Staphylococcus aureus strain BPH2947 isolate BPH2947]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=994839 EW033_RS04125 WP_001166505.1 793348..794022(+) (braR) [Staphylococcus aureus strain BPH2947 isolate BPH2947]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402