Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AAVC70_RS02705 | Genome accession | NZ_CP154898 |
| Coordinates | 361972..363009 (-) | Length | 345 a.a. |
| NCBI ID | WP_013352871.1 | Uniprot ID | A0A9P1JIA4 |
| Organism | Bacillus amyloliquefaciens strain Fad 97 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 356972..368009
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVC70_RS02655 (AAVC70_02655) | - | 357208..357993 (-) | 786 | WP_013352862.1 | TasA family protein | - |
| AAVC70_RS02660 (AAVC70_02660) | - | 358058..358642 (-) | 585 | WP_013352863.1 | signal peptidase I | - |
| AAVC70_RS02665 (AAVC70_02665) | tapA | 358614..359285 (-) | 672 | WP_013352864.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AAVC70_RS02670 (AAVC70_02670) | - | 359543..359872 (+) | 330 | WP_013352865.1 | DUF3889 domain-containing protein | - |
| AAVC70_RS02675 (AAVC70_02675) | - | 359913..360092 (-) | 180 | WP_013352866.1 | YqzE family protein | - |
| AAVC70_RS02680 (AAVC70_02680) | comGG | 360146..360523 (-) | 378 | WP_013352867.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| AAVC70_RS02685 (AAVC70_02685) | comGF | 360525..361025 (-) | 501 | WP_013352868.1 | competence type IV pilus minor pilin ComGF | - |
| AAVC70_RS02690 (AAVC70_02690) | comGE | 360934..361248 (-) | 315 | WP_014470662.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AAVC70_RS02695 (AAVC70_02695) | comGD | 361232..361669 (-) | 438 | WP_013352869.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AAVC70_RS02700 (AAVC70_02700) | comGC | 361659..361967 (-) | 309 | WP_013352870.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AAVC70_RS02705 (AAVC70_02705) | comGB | 361972..363009 (-) | 1038 | WP_013352871.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AAVC70_RS02710 (AAVC70_02710) | comGA | 362996..364066 (-) | 1071 | WP_013352872.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AAVC70_RS02715 (AAVC70_02715) | - | 364260..365210 (-) | 951 | WP_013352873.1 | magnesium transporter CorA family protein | - |
| AAVC70_RS02720 (AAVC70_02720) | - | 365357..366658 (+) | 1302 | WP_013352874.1 | hemolysin family protein | - |
| AAVC70_RS02725 (AAVC70_02725) | - | 366696..367523 (-) | 828 | WP_061573780.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39644.94 Da Isoelectric Point: 9.4989
>NTDB_id=994827 AAVC70_RS02705 WP_013352871.1 361972..363009(-) (comGB) [Bacillus amyloliquefaciens strain Fad 97]
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDSFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTNQIKKMLRYPMFLICSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
QHFHEACALGMSAVLSLFLYVWFLCKKKSPQDKMLIVVKIPLIGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAEKYTGILQPVIY
GVVAGMILLVYMSMLMPMYQMMNQM
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDSFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTNQIKKMLRYPMFLICSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
QHFHEACALGMSAVLSLFLYVWFLCKKKSPQDKMLIVVKIPLIGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAEKYTGILQPVIY
GVVAGMILLVYMSMLMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=994827 AAVC70_RS02705 WP_013352871.1 361972..363009(-) (comGB) [Bacillus amyloliquefaciens strain Fad 97]
ATGAAGCGGATTAAAAGAACCTGGCCGTTGAAGGACCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGCCTGATTGAAGGGCTCAGACTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATTC
GCCGGCTGAGAGAAGGCGATTCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCGATCTGCTAT
TTCGCGGAGAAACACGGAGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTGTTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATATGTTCCGTCTGCGTCATGTTTTATATCCTGCAAAGTTTGA
TTATTCCGCAGTTTTCAGGGATTTATCAATCAATGAATATGAATACTTCCGGTGCGACTGCTTTCATCTTTGCGTTTTTT
CAGCATTTTCATGAAGCCTGCGCACTGGGGATGTCAGCCGTTCTCAGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGACAAGATGCTTATCGTTGTGAAAATCCCCCTGATAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGTCTTTCTATCTATGACAGCTTAACTGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTACCGTGAAGAAGCAGAGATGCTCATTACACGTTTGAAGGCCGGTGAAACTATAGAATCTGCTCTTTC
CGGCCATCCGTGTTATGAAAAAGATCTTGCGGCTGCAGTCAGTCACGGACAGGCAAACGGCCGGCTTCATCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAATGCGGAGAAGTATACCGGTATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTACTTGTGTATATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAAAAGAACCTGGCCGTTGAAGGACCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGCCTGATTGAAGGGCTCAGACTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATTC
GCCGGCTGAGAGAAGGCGATTCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCGATCTGCTAT
TTCGCGGAGAAACACGGAGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTGTTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATATGTTCCGTCTGCGTCATGTTTTATATCCTGCAAAGTTTGA
TTATTCCGCAGTTTTCAGGGATTTATCAATCAATGAATATGAATACTTCCGGTGCGACTGCTTTCATCTTTGCGTTTTTT
CAGCATTTTCATGAAGCCTGCGCACTGGGGATGTCAGCCGTTCTCAGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGACAAGATGCTTATCGTTGTGAAAATCCCCCTGATAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGTCTTTCTATCTATGACAGCTTAACTGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTACCGTGAAGAAGCAGAGATGCTCATTACACGTTTGAAGGCCGGTGAAACTATAGAATCTGCTCTTTC
CGGCCATCCGTGTTATGAAAAAGATCTTGCGGCTGCAGTCAGTCACGGACAGGCAAACGGCCGGCTTCATCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAATGCGGAGAAGTATACCGGTATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTACTTGTGTATATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
66.873 |
93.623 |
0.626 |