Detailed information NTG0994774

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AAVB98_RS09130
• Genome accession: NZ_CP154895
• Coordinates: 1726507..1727619 (-)
• Length: 370 a.a.
• NCBI ID: WP_013350724.1
• Uniprot ID: A0AAE2NV61
• Organism: Bacillus amyloliquefaciens strain Fad 77
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1721507..1732619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB98_RS09115 (AAVB98_09115)	gyrA	1721595..1724054 (-)	2460	WP_013350726.1	DNA gyrase subunit A	-
AAVB98_RS09120 (AAVB98_09120)	gyrB	1724271..1726187 (-)	1917	WP_014469589.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AAVB98_RS09125 (AAVB98_09125)	-	1726244..1726489 (-)	246	WP_004392908.1	extracellular matrix/biofilm biosynthesis regulator RemA family protein	-
AAVB98_RS09130 (AAVB98_09130)	recF	1726507..1727619 (-)	1113	WP_013350724.1	DNA replication/repair protein RecF	Machinery gene
AAVB98_RS09135 (AAVB98_09135)	rlbA	1727635..1727850 (-)	216	WP_004392910.1	ribosome maturation protein RlbA	-
AAVB98_RS09140 (AAVB98_09140)	dnaN	1727990..1729126 (-)	1137	WP_014469588.1	DNA polymerase III subunit beta	-
AAVB98_RS09145 (AAVB98_09145)	dnaA	1729312..1730652 (-)	1341	WP_013350722.1	chromosomal replication initiator protein DnaA	-
AAVB98_RS09150 (AAVB98_09150)	rpmH	1731274..1731408 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
AAVB98_RS09155 (AAVB98_09155)	rnpA	1731561..1731911 (+)	351	WP_013354275.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42414.36 Da
• Isoelectric Point: 7.0883

>NTDB_id=994774 AAVB98_RS09130 WP_013350724.1 1726507..1727619(-) (recF) [Bacillus amyloliquefaciens strain Fad 77]
MYIQNLELTSYRNYERAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDEDYAKIEGRVMKRNGD
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSAVYLYDLSLYQKILSQR
NHFLKQLQSRKQTDRTMLDVLTDQLIEAAAKVVAKRLQFTAQLEKWAQPIHSGISRGLEELTLKYHTALDVSDPKDLSKI
GNSYQESFSKLKEKEIERGVTLFGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLHQAGMFRVENGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=994774 AAVB98_RS09130 WP_013350724.1 1726507..1727619(-) (recF) [Bacillus amyloliquefaciens strain Fad 77]
TTGTATATCCAAAATTTAGAATTAACATCCTACCGTAATTATGAGCGCGCTGAGCTTCAATTCGAAAACAAGGTGAATGT
GATCATCGGGGAAAATGCCCAAGGCAAAACCAATCTGATGGAAGCCATCTATGTTCTTTCGATGGCAAAATCGCACCGCA
CCTCAAATGATAAAGAACTTATACGGTGGGACGAAGACTATGCTAAAATAGAAGGAAGAGTGATGAAGCGCAACGGGGAC
ATCCCGATGCAGCTGGTCATCTCCAAAAAAGGTAAAAAGGGCAAAGTCAATCATATAGAGCAGCAAAAACTCAGTCAGTA
TGTCGGAGCGCTGAACACCATTATGTTTGCCCCCGAGGACTTAAATCTCGTTAAAGGCAGCCCTCAGGTGAGGAGGAGAT
TTCTTGATATGGAGATCGGGCAGGTATCTGCCGTTTATCTGTATGATTTATCTCTTTATCAAAAAATCCTTTCCCAGCGG
AATCATTTTCTGAAACAGCTGCAAAGCCGGAAACAGACTGACCGGACCATGCTTGACGTTCTCACTGATCAGCTGATTGA
AGCAGCCGCGAAAGTTGTCGCCAAACGTCTGCAGTTTACGGCACAGCTTGAAAAATGGGCGCAGCCGATCCATTCCGGCA
TTTCCCGGGGACTTGAGGAACTGACGCTTAAGTATCACACGGCGCTTGATGTATCAGATCCCAAAGATTTGTCGAAAATA
GGTAACAGCTACCAGGAGTCTTTTTCGAAATTAAAAGAAAAAGAAATAGAACGAGGCGTCACATTATTCGGGCCGCATCG
GGATGATGTCCTTTTTTATGTGAACGGACGCGATGTGCAGACTTACGGTTCGCAGGGACAGCAGCGTACGACGGCTTTGT
CTTTGAAGCTGGCCGAAATAGATTTAATTCATGAAGAAATCGGAGAATATCCCATTTTACTTTTGGATGATGTACTAAGC
GAGCTGGATGATTACCGCCAGTCCCATTTGCTTCATACAATCCAAGGCCGTGTGCAGACATTTGTCACCACGACGAGTGT
GGATGGCATTGACCACGAAACCTTACATCAAGCAGGAATGTTCCGTGTGGAAAACGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	94.865	100	0.949