Detailed information NTG0994755

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AAVB98_RS03005
• Genome accession: NZ_CP154895
• Coordinates: 566798..567751 (-)
• Length: 317 a.a.
• NCBI ID: WP_013351813.1
• Uniprot ID: A0AAP7TCS7
• Organism: Bacillus amyloliquefaciens strain Fad 77
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 561798..572751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB98_RS02975 (AAVB98_02975)	-	561952..562938 (-)	987	WP_013351819.1	ABC transporter ATP-binding protein	-
AAVB98_RS02980 (AAVB98_02980)	-	563111..563896 (-)	786	WP_013351818.1	DUF2268 domain-containing protein	-
AAVB98_RS02985 (AAVB98_02985)	fabF	563980..565218 (-)	1239	WP_013351817.1	beta-ketoacyl-ACP synthase II	-
AAVB98_RS02990 (AAVB98_02990)	-	565242..566180 (-)	939	WP_013351816.1	beta-ketoacyl-ACP synthase III	-
AAVB98_RS02995 (AAVB98_02995)	-	566346..566564 (+)	219	WP_013351815.1	hypothetical protein	-
AAVB98_RS03000 (AAVB98_03000)	comZ	566594..566785 (-)	192	WP_013351814.1	ComZ family protein	Regulator
AAVB98_RS03005 (AAVB98_03005)	med	566798..567751 (-)	954	WP_013351813.1	BMP family ABC transporter substrate-binding protein	Regulator
AAVB98_RS03010 (AAVB98_03010)	-	567845..568411 (-)	567	WP_013351812.1	hypothetical protein	-
AAVB98_RS03015 (AAVB98_03015)	-	568492..569226 (-)	735	WP_013351811.1	hypothetical protein	-
AAVB98_RS03020 (AAVB98_03020)	-	569487..569675 (+)	189	WP_013351810.1	YjzD family protein	-
AAVB98_RS03025 (AAVB98_03025)	-	569716..569895 (-)	180	WP_013351809.1	YjzC family protein	-
AAVB98_RS03030 (AAVB98_03030)	argF	569987..570940 (-)	954	WP_345808524.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.94 Da
• Isoelectric Point: 4.5494

>NTDB_id=994755 AAVB98_RS03005 WP_013351813.1 566798..567751(-) (med) [Bacillus amyloliquefaciens strain Fad 77]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=994755 AAVB98_RS03005 WP_013351813.1 566798..567751(-) (med) [Bacillus amyloliquefaciens strain Fad 77]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATACGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGACAAAGCTTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785