Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EW030_RS09175 Genome accession   NZ_LR130511
Coordinates   1835129..1835869 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BPH2819 isolate BPH2819     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1830129..1840869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW030_RS09150 hemH 1831005..1831928 (-) 924 WP_000162881.1 ferrochelatase -
  EW030_RS09155 hemE 1831986..1833023 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  EW030_RS09160 - 1833013..1833123 (-) 111 WP_001790154.1 hypothetical protein -
  EW030_RS09165 traP 1833286..1833789 (+) 504 WP_000737976.1 signal transduction protein TRAP -
  EW030_RS09170 ecsB 1833913..1835136 (-) 1224 WP_000551836.1 ABC transporter permease EcsB -
  EW030_RS09175 pptA 1835129..1835869 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  EW030_RS09180 - 1836003..1836425 (+) 423 WP_000004981.1 HIT family protein -
  EW030_RS09185 - 1836567..1836932 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  EW030_RS09190 - 1837667..1838224 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  EW030_RS09195 - 1838429..1839391 (+) 963 WP_000782121.1 foldase protein PrsA -
  EW030_RS09200 yhaM 1839512..1840453 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=994718 EW030_RS09175 WP_000216874.1 1835129..1835869(-) (pptA) [Staphylococcus aureus strain BPH2819 isolate BPH2819]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=994718 EW030_RS09175 WP_000216874.1 1835129..1835869(-) (pptA) [Staphylococcus aureus strain BPH2819 isolate BPH2819]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCATATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACATATAGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGACTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment