Detailed information NTG0994702

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AAVD18_RS08735
• Genome accession: NZ_CP154893
• Coordinates: 1660403..1662754 (-)
• Length: 783 a.a.
• NCBI ID: WP_041481655.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Fad 11/2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1655403..1667754

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVD18_RS08700 (AAVD18_08700)	-	1655766..1656104 (-)	339	WP_007408270.1	YqxA family protein	-
AAVD18_RS08705 (AAVD18_08705)	-	1656121..1657314 (-)	1194	WP_013352939.1	stage II sporulation protein P	-
AAVD18_RS08710 (AAVD18_08710)	gpr	1657382..1658488 (-)	1107	WP_003152878.1	GPR endopeptidase	-
AAVD18_RS08715 (AAVD18_08715)	rpsT	1658691..1658957 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
AAVD18_RS08720 (AAVD18_08720)	holA	1658974..1660015 (-)	1042	Protein_1718	DNA polymerase III subunit delta	-
AAVD18_RS08725 (AAVD18_08725)	-	1660055..1660209 (-)	155	Protein_1719	hypothetical protein	-
AAVD18_RS08730 (AAVD18_08730)	-	1660250..1660384 (+)	135	WP_003152870.1	YqzM family protein	-
AAVD18_RS08735 (AAVD18_08735)	comEC	1660403..1662754 (-)	2352	WP_041481655.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AAVD18_RS08740 (AAVD18_08740)	-	1662755..1663324 (-)	570	WP_003152868.1	ComE operon protein 2	-
AAVD18_RS08745 (AAVD18_08745)	comEA	1663391..1664005 (-)	615	WP_013352942.1	helix-hairpin-helix domain-containing protein	Machinery gene
AAVD18_RS08750 (AAVD18_08750)	comER	1664064..1664885 (+)	822	WP_013352943.1	late competence protein ComER	-
AAVD18_RS08755 (AAVD18_08755)	-	1664954..1665691 (-)	738	WP_013352944.1	class I SAM-dependent methyltransferase	-
AAVD18_RS08760 (AAVD18_08760)	rsfS	1665688..1666044 (-)	357	WP_003152864.1	ribosome silencing factor	-
AAVD18_RS08765 (AAVD18_08765)	yqeK	1666062..1666622 (-)	561	WP_013352945.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AAVD18_RS08770 (AAVD18_08770)	-	1666612..1667181 (-)	570	WP_013352946.1	nicotinate-nucleotide adenylyltransferase	-
AAVD18_RS08775 (AAVD18_08775)	yhbY	1667192..1667482 (-)	291	WP_061573777.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86760.68 Da
• Isoelectric Point: 8.9023

>NTDB_id=994702 AAVD18_RS08735 WP_041481655.1 1660403..1662754(-) (comEC) [Bacillus amyloliquefaciens strain Fad 11/2]
MKYKYLLLPLAAVSATAGIAAAHVFWVLLLFLLYLLFIMIKTKQPAPVVVCLVSFCVYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATIPGGFDYKEYLYSQQI
HWLFSVTSIEQCEKSKQPLFKLLNFRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YFLWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPV
SVIGFLLLLLSRQMGECLFDMFDLVMKPVHDFITYAASVDLFTMIVSKPDFLSLLLLAVSVFTLFAALEKGGFLKLRKSA
LFFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALFLTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILKMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGKSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPKLKADILKAGHHGSKSSTSEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDISGTIQYRFEKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=994702 AAVD18_RS08735 WP_041481655.1 1660403..1662754(-) (comEC) [Bacillus amyloliquefaciens strain Fad 11/2]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGAATTGCCGCCGCTCATGTCTTCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATGATAAAAACAAAGCAGCCTGCTCCGGTTGTTGTCTGCCTCGTTT
CTTTTTGTGTTTATTTCTTTCTTTATACGGTTTGTGACGCTGCGAATGTAACGCGGTATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAATATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACACATGACAAGGAAAAATG
GGCGGCTTCGTATAAAATCCGGTCTCTTGAGGAAAAGAGACTCATTGAACAGCTTGAACCGGGGATGCGTTGCACGTTTA
CAGGCTCTCTGGAACAGCCTGCACATGCGACGATTCCCGGAGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTTCCGTGACTTCCATTGAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAACTTCAGAAA
AAATTTGATTTCAATCATTCGGAATCACGTACCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGTGCATATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGACTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAGGCGGGGATGTTGCTGCTGCT
GTTTTTGCCGGTGTATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCTCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACTTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCGGGGAAAAGCAGACTTGCCGGGCTTGCGATGGCCTCATTCATTGCAGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAGCAAATTTCACTTGTCAGTTTTCCGATGAACATGGTGATGGTGCCATTTTATACGTTATTTGTCATTCCGGTT
TCTGTCATCGGCTTCCTTCTTCTTTTGCTTTCAAGGCAGATGGGAGAATGTTTGTTTGATATGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTCAAAGCCTGACTTTCTTTCCC
TTCTTCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTTGGAAAAGGGAGGTTTTTTAAAACTCAGGAAATCGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCGCTGTTTATAAGCGCGCCGCACCGCAAAGGGACCGTAATGGTTGATACAGGGGGAGTGATTGCTT
ATCCCGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCGTTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGTTTTTAACCCATGCGGATCAGGATCACATCGGAGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAGGATCAGAACATATTAAAAATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCGGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCATCTGACGGAAAGAGTAAAAATGATTCATCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAAGTGCTGAAAACGTATCCGAAACTGAAGGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCAACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATAT
CAGCGGAACGATTCAATACAGATTTGAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Domain of unknown function (DUF4131) (DUF4131) (25-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	56.218	98.595	0.554