Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EW030_RS03625 Genome accession   NZ_LR130511
Coordinates   733437..734408 (+) Length   323 a.a.
NCBI ID   WP_000876318.1    Uniprot ID   A0A0H2XIG1
Organism   Staphylococcus aureus strain BPH2819 isolate BPH2819     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 728437..739408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW030_RS03605 nrdI 729507..729905 (+) 399 WP_000692521.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  EW030_RS03610 nrdE 729868..731973 (+) 2106 WP_000855514.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  EW030_RS03615 nrdF 732091..733062 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  EW030_RS03620 - 733243..733398 (+) 156 WP_000499195.1 hypothetical protein -
  EW030_RS03625 ceuB 733437..734408 (+) 972 WP_000876318.1 ABC transporter permease Machinery gene
  EW030_RS03630 - 734395..735351 (+) 957 WP_001245577.1 iron chelate uptake ABC transporter family permease subunit -
  EW030_RS03635 - 735348..736109 (+) 762 WP_000616840.1 ABC transporter ATP-binding protein -
  EW030_RS03640 - 736228..737256 (+) 1029 WP_000754443.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  EW030_RS03645 - 737573..737887 (-) 315 WP_001127269.1 CHY zinc finger protein -
  EW030_RS03650 murB 737905..738828 (-) 924 WP_000608433.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35582.13 Da        Isoelectric Point: 10.1194

>NTDB_id=994663 EW030_RS03625 WP_000876318.1 733437..734408(+) (ceuB) [Staphylococcus aureus strain BPH2819 isolate BPH2819]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=994663 EW030_RS03625 WP_000876318.1 733437..734408(+) (ceuB) [Staphylococcus aureus strain BPH2819 isolate BPH2819]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAATCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGCAGTATTTGCGGTACGTTTTTATTTGTTAAAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTACCGCTTTTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACAACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGACTAGTAATACCAAATATTATTTCAATTTATCGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XIG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471

Multiple sequence alignment