Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AAFU62_RS02165 Genome accession   NZ_CP154891
Coordinates   420877..421602 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain 318231     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 415877..426602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFU62_RS02135 (AAFU62_02135) - 416056..417516 (+) 1461 WP_030126319.1 NCS2 family permease -
  AAFU62_RS02140 (AAFU62_02140) tsaE 417670..418131 (+) 462 WP_030126320.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AAFU62_RS02145 (AAFU62_02145) - 418106..418630 (+) 525 WP_111704937.1 N-acetyltransferase -
  AAFU62_RS02150 (AAFU62_02150) - 418639..419922 (+) 1284 WP_129321694.1 LCP family protein -
  AAFU62_RS02155 (AAFU62_02155) - 420033..420389 (-) 357 WP_002988657.1 hypothetical protein -
  AAFU62_RS02160 (AAFU62_02160) - 420386..420805 (-) 420 WP_011285081.1 HIT family protein -
  AAFU62_RS02165 (AAFU62_02165) pptA 420877..421602 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  AAFU62_RS02170 (AAFU62_02170) - 421605..422639 (+) 1035 WP_030126324.1 ABC transporter permease -
  AAFU62_RS02175 (AAFU62_02175) - 422703..423494 (+) 792 WP_002983385.1 phosphotransferase family protein -
  AAFU62_RS02180 (AAFU62_02180) trmB 423494..424129 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AAFU62_RS02190 (AAFU62_02190) rimP 424388..424924 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  AAFU62_RS02195 (AAFU62_02195) nusA 425099..426256 (+) 1158 WP_129321696.1 transcription termination factor NusA -
  AAFU62_RS02200 (AAFU62_02200) - 426272..426568 (+) 297 WP_002983486.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=994640 AAFU62_RS02165 WP_002983379.1 420877..421602(+) (pptA) [Streptococcus pyogenes strain 318231]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=994640 AAFU62_RS02165 WP_002983379.1 420877..421602(+) (pptA) [Streptococcus pyogenes strain 318231]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment