Detailed information NTG0099441

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QMG27_RS03245
• Genome accession: NZ_AP027058
• Coordinates: 649005..650057 (-)
• Length: 350 a.a.
• NCBI ID: WP_281813150.1
• Uniprot ID: -
• Organism: Limnohabitans sp. MORI2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 644005..655057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG27_RS03220 (LMORI2_06470)	-	644449..645447 (+)	999	WP_281813138.1	tripartite tricarboxylate transporter substrate binding protein	-
QMG27_RS03225 (LMORI2_06480)	-	645467..646462 (+)	996	WP_281813140.1	tripartite tricarboxylate transporter substrate binding protein	-
QMG27_RS03230 (LMORI2_06490)	-	646503..647684 (+)	1182	WP_281813142.1	acyl-CoA dehydrogenase	-
QMG27_RS03235 (LMORI2_06500)	rpoH	647688..648611 (-)	924	WP_281813145.1	RNA polymerase sigma factor RpoH	-
QMG27_RS03240 (LMORI2_06510)	-	648774..649001 (+)	228	WP_281813147.1	hypothetical protein	-
QMG27_RS03245 (LMORI2_06520)	pilA	649005..650057 (-)	1053	WP_281813150.1	signal recognition particle-docking protein FtsY	Machinery gene
QMG27_RS03250 (LMORI2_06530)	rsmD	650088..650711 (+)	624	WP_281813152.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QMG27_RS03255 (LMORI2_06540)	coaD	650748..651245 (+)	498	WP_281813154.1	pantetheine-phosphate adenylyltransferase	-
QMG27_RS03260 (LMORI2_06550)	-	651303..652025 (+)	723	WP_281813156.1	histidine phosphatase family protein	-
QMG27_RS03265 (LMORI2_06560)	-	652074..652328 (+)	255	WP_281813158.1	YfhL family 4Fe-4S dicluster ferredoxin	-
QMG27_RS03270 (LMORI2_06570)	-	652348..652803 (-)	456	WP_281813160.1	hypothetical protein	-
QMG27_RS03275 (LMORI2_06580)	pth	652790..653464 (-)	675	WP_281813162.1	aminoacyl-tRNA hydrolase	-
QMG27_RS03280 (LMORI2_06590)	-	653540..654151 (-)	612	WP_281813164.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 36610.64 Da
• Isoelectric Point: 6.0569

>NTDB_id=99441 QMG27_RS03245 WP_281813150.1 649005..650057(-) (pilA) [Limnohabitans sp. MORI2]
MFSFFKKKNADQPAADAKSSNTAASANAASSEAPPQQMPAERPRASWMARLGHGLRRTGQSISTVFTGTKIDDDLYEELE
TALLMADAGVQATEYLLKDLKQRVKDTATTEPSAVKALLAASIAQLLKPLEQPLTIGAHKPTVIMVAGVNGAGKTTSIGK
LTRHLSDSGASVLLAAADTFRAAAREQLAVWATRNTVEIVSQEGGDPASVSFDAVTAGRARGKDVVLVDTAGRLPTQLHL
MEELKKIKRVVQKADETGPHEVLLVIDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGVLAAIALWGQGRAAAGGS
TVPVYFIGVGEAVEDLETFNAQEFADALLG

Nucleotide

• Length: 1053 bp

>NTDB_id=99441 QMG27_RS03245 WP_281813150.1 649005..650057(-) (pilA) [Limnohabitans sp. MORI2]
ATGTTTAGCTTCTTCAAGAAAAAAAACGCTGATCAGCCTGCGGCAGACGCCAAGAGCAGCAACACAGCGGCATCCGCAAA
CGCTGCCTCATCCGAAGCCCCCCCACAACAAATGCCAGCGGAGCGCCCCCGCGCGAGCTGGATGGCTCGCTTGGGCCACG
GCCTGCGTCGCACAGGCCAAAGCATCAGCACGGTGTTCACTGGCACCAAGATTGATGACGATCTTTATGAAGAACTAGAA
ACCGCCCTGCTCATGGCCGATGCTGGCGTGCAAGCCACCGAGTATTTGCTCAAAGACTTGAAGCAGCGCGTCAAAGACAC
CGCCACGACTGAGCCATCGGCCGTCAAAGCCTTGCTGGCCGCCTCCATCGCCCAACTGCTCAAGCCGCTCGAACAGCCAC
TCACCATTGGTGCGCACAAACCCACCGTCATCATGGTGGCTGGCGTGAACGGTGCAGGTAAAACCACGTCCATTGGCAAG
CTCACCCGCCATTTGAGCGACAGCGGTGCTTCGGTGTTACTGGCCGCGGCCGACACCTTCCGCGCCGCCGCCCGCGAGCA
ACTGGCCGTATGGGCCACACGCAACACAGTAGAAATCGTCAGCCAAGAAGGCGGCGACCCCGCCTCTGTGAGCTTTGACG
CCGTCACCGCAGGCCGCGCACGCGGCAAAGACGTGGTGCTGGTTGACACCGCAGGCCGCCTGCCCACCCAGCTGCACCTG
ATGGAAGAGCTGAAAAAGATCAAACGCGTGGTGCAAAAGGCCGATGAAACTGGCCCGCATGAAGTGCTGCTGGTGATTGA
TGGCAACACCGGCCAAAACGCGCTGGCTCAGGTCAAGGCCTTTGACGAAGCGTTGGGGTTGACCGGCCTCATCGTCACCA
AGCTCGATGGCACTGCCAAAGGTGGCGTACTGGCAGCCATCGCACTGTGGGGTCAAGGCCGCGCAGCAGCAGGTGGCTCA
ACTGTGCCTGTGTATTTCATTGGTGTGGGCGAAGCCGTGGAAGACCTCGAAACCTTCAACGCCCAAGAGTTTGCCGATGC
CCTCTTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (141-350)

• SRP54-type protein, helical bundle domain (SRP54_N) (59-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.369	89.714	0.506