Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   EW025_RS09300 Genome accession   NZ_LR130238
Coordinates   1774794..1775243 (-) Length   149 a.a.
NCBI ID   WP_002986120.1    Uniprot ID   A0A0H2UT44
Organism   Streptococcus pyogenes strain HKU419 isolate HKU419     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1769794..1780243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW025_RS09280 - 1769867..1770313 (-) 447 WP_002986111.1 dUTP diphosphatase -
  EW025_RS09285 - 1770423..1771190 (-) 768 WP_002986113.1 epoxyqueuosine reductase QueH -
  EW025_RS09290 - 1771308..1773092 (-) 1785 WP_010921865.1 ABC transporter ATP-binding protein -
  EW025_RS09295 - 1773095..1774801 (-) 1707 WP_136304078.1 ABC transporter ATP-binding protein -
  EW025_RS09300 rcrR 1774794..1775243 (-) 450 WP_002986120.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  EW025_RS09305 - 1775541..1776557 (+) 1017 WP_002986123.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  EW025_RS09310 galU 1776590..1777489 (+) 900 WP_002986125.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  EW025_RS09315 - 1777588..1778259 (-) 672 WP_002991199.1 rhomboid family intramembrane serine protease -
  EW025_RS09325 - 1778584..1779717 (-) 1134 WP_011285737.1 ISAs1-like element IS1548 family transposase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17343.25 Da        Isoelectric Point: 9.5568

>NTDB_id=994359 EW025_RS09300 WP_002986120.1 1774794..1775243(-) (rcrR) [Streptococcus pyogenes strain HKU419 isolate HKU419]
MSQVIGDLRELIHQIEQISDEIAKKYDVEHLAGPQGYVLVFLAKHQNQEIFVKDIEKQLRISKSVASHLVKRMVKNGFIN
VMPSQVDKRYKQVVLAQVGRDKLPLLRECRKDIEHYFLKEITKEELLTAKKVIEQLKQNMLTYKGDNDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=994359 EW025_RS09300 WP_002986120.1 1774794..1775243(-) (rcrR) [Streptococcus pyogenes strain HKU419 isolate HKU419]
ATGTCACAAGTGATAGGTGATTTACGTGAATTGATACATCAAATCGAACAAATTAGTGATGAGATTGCAAAAAAATATGA
TGTAGAGCATCTAGCAGGTCCTCAAGGTTATGTTCTTGTTTTTTTAGCTAAACACCAAAATCAAGAAATATTTGTCAAAG
ATATTGAAAAACAACTTCGTATCTCAAAGTCAGTTGCTAGTCATTTAGTGAAACGTATGGTCAAAAATGGGTTTATCAAT
GTGATGCCTTCCCAAGTGGATAAGCGTTATAAGCAAGTAGTGTTAGCGCAGGTTGGTAGAGATAAATTGCCTTTGTTGCG
GGAGTGTCGTAAGGATATCGAGCACTATTTTTTAAAAGAAATTACAAAAGAAGAGTTGCTGACAGCGAAAAAAGTAATTG
AACAGCTCAAGCAAAATATGCTAACTTATAAAGGAGACAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UT44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

47.143

93.96

0.443

Multiple sequence alignment