Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   EW024_RS01140 Genome accession   NZ_LR130237
Coordinates   199591..200040 (+) Length   149 a.a.
NCBI ID   WP_002986120.1    Uniprot ID   A0A0H2UT44
Organism   Streptococcus pyogenes strain SP444 isolate SP444     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 194591..205040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW024_RS01115 - 195185..196249 (+) 1065 Protein_167 ISAs1 family transposase -
  EW024_RS01125 - 196574..197245 (+) 672 WP_011017305.1 rhomboid family intramembrane serine protease -
  EW024_RS01130 galU 197345..198244 (-) 900 WP_002986125.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  EW024_RS01135 - 198277..199293 (-) 1017 WP_002986123.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  EW024_RS01140 rcrR 199591..200040 (+) 450 WP_002986120.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  EW024_RS01145 - 200033..201739 (+) 1707 WP_146707952.1 ABC transporter ATP-binding protein -
  EW024_RS01150 - 201742..203526 (+) 1785 WP_021299349.1 ABC transporter ATP-binding protein -
  EW024_RS01155 - 203644..204411 (+) 768 WP_011054158.1 epoxyqueuosine reductase QueH -
  EW024_RS01160 - 204521..204967 (+) 447 WP_011528219.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17343.25 Da        Isoelectric Point: 9.5568

>NTDB_id=994194 EW024_RS01140 WP_002986120.1 199591..200040(+) (rcrR) [Streptococcus pyogenes strain SP444 isolate SP444]
MSQVIGDLRELIHQIEQISDEIAKKYDVEHLAGPQGYVLVFLAKHQNQEIFVKDIEKQLRISKSVASHLVKRMVKNGFIN
VMPSQVDKRYKQVVLAQVGRDKLPLLRECRKDIEHYFLKEITKEELLTAKKVIEQLKQNMLTYKGDNDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=994194 EW024_RS01140 WP_002986120.1 199591..200040(+) (rcrR) [Streptococcus pyogenes strain SP444 isolate SP444]
ATGTCACAAGTGATAGGTGATTTACGTGAATTGATACATCAAATCGAACAAATTAGTGATGAGATTGCAAAAAAATATGA
TGTAGAGCATCTAGCAGGTCCTCAAGGTTATGTTCTTGTTTTTTTAGCTAAACACCAAAATCAAGAAATATTTGTCAAAG
ATATTGAAAAACAACTTCGTATCTCAAAGTCAGTTGCTAGTCATTTAGTGAAACGTATGGTCAAAAATGGGTTTATCAAT
GTGATGCCTTCCCAAGTGGATAAGCGTTATAAGCAAGTAGTGTTAGCGCAGGTTGGTAGAGATAAATTGCCTTTGTTGCG
GGAGTGTCGTAAGGATATCGAGCACTATTTTTTAAAAGAAATTACAAAAGAAGAGTTGCTGACAGCGAAAAAAGTAATTG
AACAGCTCAAGCAAAATATGCTAACTTATAAAGGAGACAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UT44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

47.143

93.96

0.443