Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AAJG31_RS15640 Genome accession   NZ_CP154860
Coordinates   3171662..3172612 (+) Length   316 a.a.
NCBI ID   WP_048394199.1    Uniprot ID   A0A2X0XHC4
Organism   Lysinibacillus sp. BS3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3166662..3177612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAJG31_RS15620 (AAJG31_15620) - 3167177..3168322 (+) 1146 WP_048394190.1 M20 peptidase aminoacylase family protein -
  AAJG31_RS15625 (AAJG31_15625) - 3168322..3169146 (+) 825 WP_279493298.1 GNAT family N-acetyltransferase -
  AAJG31_RS15630 (AAJG31_15630) menC 3169168..3170274 (+) 1107 WP_279493296.1 o-succinylbenzoate synthase -
  AAJG31_RS15635 (AAJG31_15635) - 3170325..3171377 (+) 1053 WP_054549616.1 hypothetical protein -
  AAJG31_RS15640 (AAJG31_15640) ceuB 3171662..3172612 (+) 951 WP_048394199.1 ABC transporter permease Machinery gene
  AAJG31_RS15645 (AAJG31_15645) - 3172605..3173558 (+) 954 WP_004231949.1 iron chelate uptake ABC transporter family permease subunit -
  AAJG31_RS15650 (AAJG31_15650) - 3173555..3174316 (+) 762 WP_048394201.1 ABC transporter ATP-binding protein -
  AAJG31_RS15655 (AAJG31_15655) - 3174378..3175403 (+) 1026 WP_054549615.1 siderophore ABC transporter substrate-binding protein -
  AAJG31_RS15660 (AAJG31_15660) - 3175405..3175719 (+) 315 WP_048394205.1 antibiotic biosynthesis monooxygenase -
  AAJG31_RS15665 (AAJG31_15665) - 3176372..3176917 (-) 546 WP_103118905.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34810.02 Da        Isoelectric Point: 10.1980

>NTDB_id=994189 AAJG31_RS15640 WP_048394199.1 3171662..3172612(+) (ceuB) [Lysinibacillus sp. BS3]
MKIRYLLTATVLLSIVSLFIGVVDIKPSDLLDFQSEEARLFLISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGVLISMMFFTNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMFGNILSSVTTFFAYKANII
QNISAWLQGDFSLIMKGRYELLYVSVPILILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALISTTVVLTVGI
IPFLGLIIPNIISLFKGDNLAKTLPHTALLGMSFLLFCDILGRVLIFPYEIPISMTVGVIGSAIFLFMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=994189 AAJG31_RS15640 WP_048394199.1 3171662..3172612(+) (ceuB) [Lysinibacillus sp. BS3]
ATGAAAATAAGATATCTTTTAACAGCAACTGTTTTGCTGTCTATTGTGTCGCTCTTTATCGGAGTAGTAGATATTAAGCC
TAGCGACCTATTAGACTTCCAATCAGAAGAAGCTAGACTATTTTTAATTAGTCGTGTACCTAGACTTGTTGCAATCTTGC
TAGCGGGTGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAATTCGTTTCACCAACAACAGCT
GGTACATTAGATGCCACACGGTTGGGTGTATTGATTTCCATGATGTTCTTTACGAACGTTACGTATTTCCAAAAAATTTC
CTTCGCTTTCATATTTGCTTTAGCCGGCACATTACTATTTATGCAAATATTAAACCGAATTAAGTTTAAAGATGCGATTT
TTATACCGCTTATTGGCTTAATGTTTGGGAATATTTTGTCCTCTGTTACAACATTCTTTGCATATAAGGCGAATATTATC
CAAAACATTTCTGCATGGTTACAAGGAGATTTCTCATTAATCATGAAAGGCCGTTACGAACTGTTATACGTAAGTGTACC
AATACTCATTTTAGCTTACATTTACGCAAATCGTTTTACAGTAGCTGGGATGGGAGAGGATTTTGCAAAAAATCTTGGTC
TATCCTATAAATTTGTAGTCAATTTAGGCTTGGTGTTGGTAGCTCTTATCTCCACAACAGTGGTGTTAACAGTCGGTATC
ATTCCATTTCTTGGTTTGATTATTCCGAACATTATTTCCCTGTTTAAAGGTGATAATTTGGCAAAAACCTTGCCGCACAC
AGCATTACTTGGTATGTCATTCTTGTTATTCTGTGATATTTTAGGACGAGTACTGATTTTCCCTTATGAAATACCAATAA
GTATGACTGTTGGTGTAATTGGAAGTGCCATCTTCCTATTCATGTTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X0XHC4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment