Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   EW024_RS00260 Genome accession   NZ_LR130237
Coordinates   33526..34281 (+) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain SP444 isolate SP444     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28526..39281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW024_RS09550 - 29627..29764 (-) 138 Protein_14 ISL3 family transposase -
  EW024_RS09555 - 29911..30192 (-) 282 WP_074375313.1 transposase -
  EW024_RS00250 pcsB 30929..32125 (+) 1197 WP_011017226.1 peptidoglycan hydrolase PcsB -
  EW024_RS00255 - 32378..33340 (+) 963 WP_002986722.1 ribose-phosphate diphosphokinase -
  EW024_RS00260 recO 33526..34281 (+) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  EW024_RS00265 plsX 34384..35391 (+) 1008 WP_002987696.1 phosphate acyltransferase PlsX -
  EW024_RS00270 - 35384..35626 (+) 243 WP_002993445.1 phosphopantetheine-binding protein -
  EW024_RS00275 purC 35778..36482 (+) 705 WP_028797123.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=994180 EW024_RS00260 WP_002986719.1 33526..34281(+) (recO) [Streptococcus pyogenes strain SP444 isolate SP444]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=994180 EW024_RS00260 WP_002986719.1 33526..34281(+) (recO) [Streptococcus pyogenes strain SP444 isolate SP444]
ATGCAACTAACAGAATCACTAGGCATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGCACTGATTTA
CCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602