Detailed information    

insolico Bioinformatically predicted

Overview


Name   uvrA   Type   Machinery gene
Locus tag   H702_RS02790 Genome accession   NZ_AUZH01000012
Coordinates   96530..99355 (+) Length   941 a.a.
NCBI ID   WP_039696328.1    Uniprot ID   A0A091BRQ4
Organism   Streptococcus equinus JB1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 91530..104355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H702_RS02750 (H702_02845) rpsF 91816..92106 (+) 291 WP_006531977.1 30S ribosomal protein S6 -
  H702_RS02755 (H702_02850) ssb 92118..92624 (+) 507 WP_039696324.1 single-stranded DNA-binding protein Machinery gene
  H702_RS02760 (H702_02855) rpsR 92685..92924 (+) 240 WP_000068664.1 30S ribosomal protein S18 -
  H702_RS10475 - 93072..93305 (+) 234 WP_236726576.1 hypothetical protein -
  H702_RS10480 - 93326..93595 (+) 270 WP_236726577.1 hypothetical protein -
  H702_RS02770 (H702_02865) - 93597..93821 (+) 225 WP_039696444.1 helix-turn-helix domain-containing protein -
  H702_RS02775 (H702_02870) - 93808..94251 (+) 444 WP_039696325.1 hypothetical protein -
  H702_RS02780 (H702_02875) - 94299..94952 (-) 654 WP_039696326.1 DUF1129 domain-containing protein -
  H702_RS02785 (H702_02880) - 95289..96233 (-) 945 WP_039696327.1 magnesium transporter CorA family protein -
  H702_RS02790 (H702_02885) uvrA 96530..99355 (+) 2826 WP_039696328.1 excinuclease ABC subunit UvrA Machinery gene
  H702_RS02795 (H702_02890) - 99452..100708 (+) 1257 WP_039696445.1 MATE family efflux transporter -
  H702_RS02800 (H702_02900) - 100842..101903 (+) 1062 WP_039696329.1 M24 family metallopeptidase -
  H702_RS02805 (H702_02905) - 101934..102398 (+) 465 WP_021143082.1 deoxycytidylate deaminase -
  H702_RS02810 (H702_02910) - 102437..102751 (-) 315 WP_039696330.1 membrane protein -
  H702_RS02815 (H702_02915) efp 102935..103495 (+) 561 WP_024343582.1 elongation factor P -
  H702_RS02820 (H702_02920) - 103575..103964 (+) 390 WP_014335250.1 Asp23/Gls24 family envelope stress response protein -

Sequence


Protein


Download         Length: 941 a.a.        Molecular weight: 103994.20 Da        Isoelectric Point: 6.1208

>NTDB_id=99409 H702_RS02790 WP_039696328.1 96530..99355(+) (uvrA) [Streptococcus equinus JB1]
MQDKLIIRGARAHNLKNVNVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARMFLGNMEKPDVDSIEGL
SPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPYCINGHGAITASSVEQIVDQVLALPERTRMQILAPVVRRKK
GQHKTIFDRIQKDGYVRVRVDGEIYDISEVPELSKSKMHNIEIVVDRLINKDGIRSRLFDSVEAALRLADGYVIIDTMDG
NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGNKLEVDLDLVIPDRSKTLREGALAPWNPISSNYYPAML
EQAMEAFGVDMDTPFEDLSEEEQNLVLYGSGEREFHFHYVNDFGGERNIDLPFEGVVNNINRRYHETNSDFTRNVMRGYM
NELPCPTCHGYRLNNQALCVRVGGENGLNIGQVSDLSVADHLELLNHLELSENEKTIATPIVKEIKDRLTFLNNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIDSLKKMRDLGNTLIVVEHDEDTMRQADWLI
DVGPGAGEFGGQIVASGTPEEVAKNKKSITGQYLSGAKEIPVPLERRKGNGRFLRVLGACENNLQNIDVTFPLGKFIAVT
GVSGSGKSTLVNSILKKAVAQKLNRNSAKPGKHKALEGVENIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHYKDKNIAEILDMTVNDAVEFF
APIPKIARKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLQRFVD
DGNTVLVIEHNLDVIKTADYIIDLGPEGGVGGGQIVATGTPEEVAKVKESFTGQYLKDKLK

Nucleotide


Download         Length: 2826 bp        

>NTDB_id=99409 H702_RS02790 WP_039696328.1 96530..99355(+) (uvrA) [Streptococcus equinus JB1]
ATGCAAGATAAATTGATTATTCGTGGGGCTCGTGCCCACAATTTAAAAAATGTCAATGTTGAGATTCCACGGGACAAATT
AGTTGTTGTGACTGGTTTATCAGGTTCTGGAAAATCAAGTTTGGCATTTGATACGATTTACGCAGAAGGGCAACGTCGTT
ACGTTGAAAGCTTGTCTGCTTATGCCCGCATGTTTCTTGGTAATATGGAAAAACCAGATGTGGATTCGATTGAAGGTCTT
AGCCCTGCTATTTCCATTGACCAAAAAACAACAAGTAAAAACCCACGTTCTACTGTAGGGACAACGACAGAAATTAATGA
TTATCTGCGTTTGTTGTATGCGCGTGTGGGAACGCCTTACTGTATTAATGGGCATGGTGCCATTACAGCGTCATCAGTTG
AGCAGATTGTTGATCAGGTTTTAGCTTTGCCAGAGCGTACACGTATGCAGATTTTAGCGCCGGTGGTGCGTCGTAAAAAA
GGGCAACACAAGACAATTTTTGACCGCATTCAAAAAGATGGTTATGTGCGTGTGCGCGTGGACGGTGAGATTTATGATAT
TTCAGAAGTGCCAGAGCTTTCTAAGAGCAAAATGCACAATATTGAAATTGTCGTGGACCGTTTGATTAATAAAGACGGTA
TTCGTTCACGTCTTTTTGATTCTGTGGAAGCTGCGCTTCGTTTGGCAGATGGTTATGTCATCATCGATACCATGGATGGC
AATGAATTGCTTTTTTCTGAACATTACTCATGTCCAGTCTGTGGTTTTACGGTGCCAGAGCTAGAACCACGTCTTTTCTC
ATTTAATGCGCCATTTGGGTCATGTCCAACTTGTGATGGCTTGGGAAACAAACTGGAAGTTGACTTGGATTTGGTGATTC
CTGACCGCAGCAAAACGCTTCGTGAAGGAGCGCTAGCGCCATGGAATCCAATCTCATCAAACTATTACCCTGCTATGCTT
GAACAAGCCATGGAAGCTTTTGGGGTTGATATGGATACGCCTTTTGAAGACTTGAGCGAAGAAGAGCAAAATCTTGTGCT
TTATGGTTCGGGTGAGCGCGAATTCCATTTCCACTATGTCAATGATTTTGGTGGTGAACGCAATATTGACCTTCCGTTTG
AAGGGGTGGTTAATAACATTAACCGTCGTTACCACGAGACAAATAGCGACTTCACTCGTAACGTTATGCGCGGCTACATG
AATGAATTGCCATGTCCAACTTGTCATGGTTACCGTTTGAATAATCAAGCGCTCTGCGTTCGTGTGGGTGGTGAAAATGG
TTTGAATATTGGACAAGTGTCTGATTTGTCAGTTGCTGACCACTTGGAACTCTTGAATCATCTAGAACTCTCTGAAAATG
AAAAAACGATTGCCACACCAATCGTTAAGGAAATCAAAGACCGTTTGACTTTCTTAAATAACGTAGGATTGAATTATTTG
ACCTTGTCACGTTCTGCGGGCACTTTGTCTGGTGGTGAAAGTCAGCGTATTCGCTTGGCGACACAAATTGGTTCAAACTT
GTCTGGCGTCCTTTATATCCTTGATGAACCGTCGATTGGTCTTCATCAACGTGACAATGATCGCTTGATTGATAGTTTGA
AGAAAATGCGTGATCTCGGAAATACCTTAATTGTCGTTGAACACGACGAAGATACTATGCGTCAAGCTGATTGGTTGATT
GATGTCGGACCAGGAGCTGGTGAATTTGGTGGGCAAATCGTCGCTTCAGGAACGCCAGAAGAAGTTGCTAAGAATAAAAA
ATCAATCACAGGTCAATATCTATCAGGTGCCAAAGAAATTCCAGTTCCGCTTGAACGTCGTAAAGGTAACGGACGTTTCC
TACGAGTGCTTGGTGCTTGTGAAAATAACTTGCAAAATATCGACGTGACTTTCCCACTTGGTAAATTTATCGCAGTAACA
GGTGTTTCAGGTTCTGGAAAATCAACCTTGGTCAACAGTATTTTGAAAAAAGCTGTCGCTCAAAAATTAAACCGAAATTC
TGCCAAACCTGGTAAACACAAAGCACTTGAAGGTGTGGAAAACATCGAACGCTTGATTGACATTGACCAAAGCCCAATCG
GTCGTACACCGCGTTCAAATCCTGCAACTTATACAGGTGTCTTTGATGATATTCGTGACCTTTTTGCTAAGACCAATGAA
GCTAAAATTCGTGGTTACAAGAAAGGGCGCTTCTCATTTAACGTCAAAGGTGGACGTTGTGAGGCTTGTTCTGGTGATGG
TATTATCAAGATTGAAATGCACTTTTTGCCAGATGTTTACGTACCATGTGAAGTTTGCCACGGTACACGTTATAACAGTG
AAACGCTTGAAGTTCATTACAAAGATAAAAATATCGCTGAAATCCTTGATATGACAGTCAACGATGCCGTTGAATTCTTT
GCACCAATTCCTAAAATCGCACGCAAATTGCAAACTATCAAAGACGTTGGACTTGGTTATGTCACACTTGGACAACCTGC
AACAACCCTTTCTGGTGGTGAAGCACAGCGTATGAAATTGGCGAGTGAACTTCACAAACGCTCAACTGGTAAGAGTCTTT
ATATCCTTGATGAACCAACGACAGGTCTTCACACAGATGACATTGCTCGTCTGCTTAAAGTCCTTCAACGTTTCGTGGAT
GATGGAAATACTGTGCTTGTCATTGAACACAATCTTGATGTGATTAAGACAGCTGACTATATTATCGACCTTGGACCAGA
AGGCGGTGTCGGTGGCGGACAAATCGTTGCCACAGGCACACCAGAAGAAGTCGCCAAAGTCAAAGAATCCTTCACAGGAC
AATACTTGAAAGATAAATTGAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A091BRQ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

84.681

99.894

0.846

  uvrA Streptococcus pneumoniae TIGR4

84.681

99.894

0.846

  uvrA Streptococcus pneumoniae D39

84.681

99.894

0.846