Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAH980_RS02250 | Genome accession | NZ_CP154856 |
| Coordinates | 464983..465363 (+) | Length | 126 a.a. |
| NCBI ID | WP_284080191.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain Ab25 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 459983..470363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAH980_RS02220 (AAH980_02220) | kdsB | 460885..461646 (+) | 762 | WP_151687044.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AAH980_RS02225 (AAH980_02225) | - | 461658..462638 (+) | 981 | WP_284080193.1 | DNA polymerase III subunit delta' | - |
| AAH980_RS02230 (AAH980_02230) | - | 462651..462992 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| AAH980_RS02235 (AAH980_02235) | - | 463010..463783 (+) | 774 | WP_017392856.1 | TatD family hydrolase | - |
| AAH980_RS02240 (AAH980_02240) | - | 463821..464429 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AAH980_RS02245 (AAH980_02245) | - | 464442..464993 (+) | 552 | WP_002049902.1 | type II secretion system protein | - |
| AAH980_RS02250 (AAH980_02250) | xcpV | 464983..465363 (+) | 381 | WP_284080191.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAH980_RS02255 (AAH980_02255) | xcpW | 465363..466178 (+) | 816 | WP_151818028.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAH980_RS02260 (AAH980_02260) | gspK | 466178..467137 (+) | 960 | WP_284080189.1 | type II secretion system minor pseudopilin GspK | - |
| AAH980_RS02265 (AAH980_02265) | - | 467367..467963 (+) | 597 | WP_004887474.1 | 6-carboxytetrahydropterin synthase | - |
| AAH980_RS02270 (AAH980_02270) | ung | 468014..468727 (+) | 714 | WP_002049829.1 | uracil-DNA glycosylase | - |
| AAH980_RS02275 (AAH980_02275) | - | 468724..469848 (+) | 1125 | WP_284080188.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAH980_RS02280 (AAH980_02280) | tadA | 469855..470358 (+) | 504 | WP_031944625.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14008.21 Da Isoelectric Point: 9.7155
>NTDB_id=994065 AAH980_RS02250 WP_284080191.1 464983..465363(+) (xcpV) [Acinetobacter nosocomialis strain Ab25]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMTEINQEWLQGTQTKQVTSQGETWQI
YKSAESTVSPNVQKIDVQVSLYDPDKGKLQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIAMTEINQEWLQGTQTKQVTSQGETWQI
YKSAESTVSPNVQKIDVQVSLYDPDKGKLQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=994065 AAH980_RS02250 WP_284080191.1 464983..465363(+) (xcpV) [Acinetobacter nosocomialis strain Ab25]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGACGGAGATTAATCAAGAGTGGCTGCAGGGCACTCAAACTAAGCAAGTAACTTCTCAAGGAGAGACTTGGCAGATT
TATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAATTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTAGCAGCTGTTGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCTACTTCTAATGCCATTTTAAGAACTAAAGCTCAATTTGTAGCTATGAATGAAATTG
CTATGACGGAGATTAATCAAGAGTGGCTGCAGGGCACTCAAACTAAGCAAGTAACTTCTCAAGGAGAGACTTGGCAGATT
TATAAATCAGCTGAATCAACTGTTAGCCCTAATGTTCAAAAAATTGATGTACAAGTTAGCTTATATGATCCGGATAAGGG
AAAATTACAAAACGGTATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |