Detailed information NTG0994059

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP95_RS07900
• Genome accession: NZ_CP154829
• Coordinates: 1502608..1503558 (+)
• Length: 316 a.a.
• NCBI ID: WP_002899461.1
• Uniprot ID: A0A5Z1S6J2
• Organism: Campylobacter jejuni strain Z1323HCJ0055
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1497608..1508558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP95_RS07885 (WHP95_07885)	-	1498456..1500387 (-)	1932	WP_052785346.1	hypothetical protein	-
WHP95_RS07890 (WHP95_07890)	-	1500463..1501737 (+)	1275	WP_052785345.1	DUF2972 domain-containing protein	-
WHP95_RS07895 (WHP95_07895)	-	1501701..1502549 (-)	849	WP_002899460.1	glycosyltransferase family 2 protein	-
WHP95_RS07900 (WHP95_07900)	waaF	1502608..1503558 (+)	951	WP_002899461.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP95_RS07905 (WHP95_07905)	-	1503544..1504308 (-)	765	WP_002899462.1	glycosyltransferase family 25 protein	-
WHP95_RS07910 (WHP95_07910)	gmhA	1504308..1504868 (-)	561	WP_002881439.1	D-sedoheptulose 7-phosphate isomerase	-
WHP95_RS07915 (WHP95_07915)	rfaE1	1504865..1506250 (-)	1386	WP_052785344.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP95_RS07920 (WHP95_07920)	rfaD	1506243..1507196 (-)	954	WP_038813706.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP95_RS07925 (WHP95_07925)	gmhB	1507197..1507757 (-)	561	WP_052794772.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP95_RS07930 (WHP95_07930)	-	1507839..1508141 (+)	303	WP_002852762.1	cytochrome c	-
WHP95_RS07935 (WHP95_07935)	ccoS	1508164..1508370 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36265.84 Da
• Isoelectric Point: 10.2322

>NTDB_id=994059 WHP95_RS07900 WP_002899461.1 1502608..1503558(+) (waaF) [Campylobacter jejuni strain Z1323HCJ0055]
MKIFIHLPTWLGDAVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=994059 WHP95_RS07900 WP_002899461.1 1502608..1503558(+) (waaF) [Campylobacter jejuni strain Z1323HCJ0055]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCACGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGTTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGATAGT
GGCCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAACGAAAATGCAAAATTAGTACATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: A0A5Z1S6J2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.541	99.367	0.949