Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP95_RS07580 | Genome accession | NZ_CP154829 |
| Coordinates | 1437218..1437520 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain Z1323HCJ0055 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1432218..1442520
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP95_RS07555 (WHP95_07555) | rpsR | 1432581..1432841 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP95_RS07560 (WHP95_07560) | lon | 1432901..1435276 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP95_RS07565 (WHP95_07565) | - | 1435293..1435940 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP95_RS07570 (WHP95_07570) | fliW | 1436101..1436490 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP95_RS07575 (WHP95_07575) | proC | 1436490..1437221 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP95_RS07580 (WHP95_07580) | ctsT | 1437218..1437520 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| WHP95_RS07585 (WHP95_07585) | - | 1437517..1438179 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| WHP95_RS07590 (WHP95_07590) | - | 1438176..1438628 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| WHP95_RS07595 (WHP95_07595) | hemD | 1438625..1439254 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| WHP95_RS07600 (WHP95_07600) | thiE | 1439232..1439864 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| WHP95_RS07605 (WHP95_07605) | thiD | 1439854..1440666 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP95_RS07610 (WHP95_07610) | - | 1440663..1441349 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| WHP95_RS07615 (WHP95_07615) | - | 1441346..1442107 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=994057 WHP95_RS07580 WP_002855822.1 1437218..1437520(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0055]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=994057 WHP95_RS07580 WP_002855822.1 1437218..1437520(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0055]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |