Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   WHP95_RS00435 Genome accession   NZ_CP154829
Coordinates   94158..95342 (-) Length   394 a.a.
NCBI ID   WP_002871988.1    Uniprot ID   A0A381CRB9
Organism   Campylobacter jejuni strain Z1323HCJ0055     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 89158..100342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP95_RS00410 (WHP95_00410) fliL 90306..90842 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  WHP95_RS00415 (WHP95_00415) acpS 90842..91189 (+) 348 WP_002825806.1 holo-ACP synthase -
  WHP95_RS00420 (WHP95_00420) - 91190..91609 (-) 420 WP_002780440.1 hypothetical protein -
  WHP95_RS00425 (WHP95_00425) - 91606..92967 (-) 1362 WP_002875238.1 cytochrome P450 -
  WHP95_RS00430 (WHP95_00430) - 92964..94085 (-) 1122 WP_002898733.1 hypothetical protein -
  WHP95_RS00435 (WHP95_00435) kpsS 94158..95342 (-) 1185 WP_002871988.1 capsule polysaccharide modification protein KpsS Regulator
  WHP95_RS00440 (WHP95_00440) kpsC 95339..97408 (-) 2070 WP_002898735.1 capsular polysaccharide biosynthesis protein -
  WHP95_RS00445 (WHP95_00445) cysC 97405..97917 (-) 513 WP_002818256.1 cytidine diphosphoramidate kinase -
  WHP95_RS00450 (WHP95_00450) - 97907..98668 (-) 762 WP_002871991.1 CTP:phosphoglutamine cytidylyltransferase -
  WHP95_RS00455 (WHP95_00455) - 98670..99272 (-) 603 WP_002825815.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46851.51 Da        Isoelectric Point: 9.9073

>NTDB_id=994039 WHP95_RS00435 WP_002871988.1 94158..95342(-) (kpsS) [Campylobacter jejuni strain Z1323HCJ0055]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=994039 WHP95_RS00435 WP_002871988.1 94158..95342(-) (kpsS) [Campylobacter jejuni strain Z1323HCJ0055]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTAGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A381CRB9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

99.239

100

0.992


Multiple sequence alignment