Detailed information NTG0099394

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QMG88_RS17190
• Genome accession: NZ_AP027052
• Coordinates: 3737688..3738692 (+)
• Length: 334 a.a.
• NCBI ID: WP_004405365.1
• Uniprot ID: A0AAV2VU79
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3732688..3743692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG88_RS17170 (TUMSATVNIG3_33380)	metJ	3732759..3733079 (+)	321	WP_004405361.1	met regulon transcriptional regulator MetJ	-
QMG88_RS17175 (TUMSATVNIG3_33390)	-	3733183..3734442 (-)	1260	WP_045963009.1	malic enzyme-like NAD(P)-binding protein	-
QMG88_RS17180 (TUMSATVNIG3_33400)	rpmE	3734712..3734930 (-)	219	WP_004405363.1	50S ribosomal protein L31	-
QMG88_RS17185 (TUMSATVNIG3_33410)	priA	3735234..3737435 (+)	2202	WP_281827797.1	primosomal protein N'	-
QMG88_RS17190 (TUMSATVNIG3_33420)	cytR	3737688..3738692 (+)	1005	WP_004405365.1	DNA-binding transcriptional regulator CytR	Regulator
QMG88_RS17195 (TUMSATVNIG3_33430)	-	3738819..3739355 (+)	537	WP_022551984.1	SPOR domain-containing protein	-
QMG88_RS17200 (TUMSATVNIG3_33440)	hslV	3739475..3740014 (+)	540	WP_022591191.1	ATP-dependent protease subunit HslV	-
QMG88_RS17205 (TUMSATVNIG3_33450)	hslU	3740025..3741356 (+)	1332	WP_022591190.1	HslU--HslV peptidase ATPase subunit	-
QMG88_RS17210 (TUMSATVNIG3_33460)	-	3741483..3742400 (+)	918	WP_281827802.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QMG88_RS17215 (TUMSATVNIG3_33470)	rraA	3742479..3743009 (+)	531	WP_281827804.1	ribonuclease E activity regulator RraA	-
QMG88_RS17220 (TUMSATVNIG3_33480)	zapB	3743182..3743424 (-)	243	WP_004405374.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36408.85 Da
• Isoelectric Point: 6.0502

>NTDB_id=99394 QMG88_RS17190 WP_004405365.1 3737688..3738692(+) (cytR) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
MATMKDVAQLAGVSTATVSRALMNPEKVSSTTRKRVESAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDSYFTEIIRG
IEDVAVENGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTHLPFDVSKPEQKNLPPLVMACEFAPELELPTVHIDN
LTSSFEAVNYLTQMGHSKIAQISGPDDAALCQFRNQGYQQALRRAGITMNPTYKEMGDFTFESGQKAIAKLLALPEPPTA
VFCHNDAMAIGAIKGAKAAGLKVPQDLSVVGFDDIQFAEFCDPPLTTITQPRYEIGRQAMLMLLEILKGRDVHAGSRLLE
TELKIRDSAAPPRS

Nucleotide

• Length: 1005 bp

>NTDB_id=99394 QMG88_RS17190 WP_004405365.1 3737688..3738692(+) (cytR) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGAGTTTCAACTGCAACGGTATCGAGGGCTTTGATGAATCCTGAGAA
GGTTTCGTCGACGACACGTAAACGTGTGGAAAGCGCCGTTTTGGAAGCTGGTTATTCGCCGAATTCACTGGCAAGAAACT
TACGACGTAATGAATCCAAAACTATCGTTGCAATCGTCCCTGACATTTGCGACTCCTACTTTACAGAGATCATTCGCGGC
ATTGAGGATGTAGCCGTGGAAAACGGGTATCTCGTATTGTTAGGAGACAGCGGTCAGCAGAAGAAACGAGAGAGCTCACT
GGTCAACCTGGTCTTTACCAAACAAGCAGACGGCATGTTGTTATTGGGGACACACCTGCCGTTTGATGTCAGCAAACCGG
AACAGAAGAACTTGCCACCACTGGTCATGGCTTGTGAATTCGCACCGGAACTGGAATTGCCGACAGTGCACATTGATAAC
CTAACGTCTTCGTTCGAAGCGGTGAACTACCTCACCCAAATGGGTCATTCGAAGATTGCTCAGATTTCAGGGCCTGACGA
TGCAGCATTGTGTCAGTTCCGTAACCAAGGTTATCAGCAGGCTTTACGTCGCGCTGGCATCACCATGAATCCAACCTATA
AGGAAATGGGCGATTTCACCTTTGAATCAGGGCAAAAGGCAATCGCAAAACTTCTGGCACTTCCGGAACCACCAACTGCC
GTTTTCTGCCACAATGACGCCATGGCAATCGGCGCTATTAAGGGAGCAAAAGCGGCTGGATTGAAAGTACCTCAAGACCT
GTCTGTTGTCGGGTTTGATGATATTCAGTTCGCGGAGTTCTGTGATCCACCATTGACGACGATTACCCAACCTCGCTACG
AGATCGGTCGTCAGGCAATGTTGATGCTGCTTGAGATACTCAAAGGCAGAGATGTACATGCCGGATCACGTCTACTGGAA
ACAGAACTGAAAATCCGAGACAGCGCAGCGCCTCCAAGAAGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	85.843	99.401	0.853
cytR	Vibrio parahaemolyticus RIMD 2210633	83.483	99.701	0.832