Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EQB41_RS05655 Genome accession   NZ_LR129840
Coordinates   1040076..1040540 (+) Length   154 a.a.
NCBI ID   WP_001135782.1    Uniprot ID   P59659
Organism   Streptococcus pneumoniae strain 4496 isolate 4496     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1035076..1045540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQB41_RS12725 - 1037209..1037283 (+) 75 Protein_1068 dihydroxyacetone kinase subunit L -
  EQB41_RS05635 - 1037283..1037495 (+) 213 Protein_1069 PTS mannose family transporter subunit IIA -
  EQB41_RS05640 - 1037903..1038616 (+) 714 WP_000499433.1 YjjG family noncanonical pyrimidine nucleotidase -
  EQB41_RS05645 - 1038630..1039277 (+) 648 WP_001824648.1 hypothetical protein -
  EQB41_RS05650 - 1039413..1040066 (+) 654 WP_000401328.1 uracil-DNA glycosylase -
  EQB41_RS05655 mutX 1040076..1040540 (+) 465 WP_001135782.1 NUDIX hydrolase Machinery gene
  EQB41_RS05660 - 1040553..1041821 (+) 1269 WP_033705552.1 dihydroorotase -
  EQB41_RS05665 - 1041835..1042095 (+) 261 WP_001105925.1 hypothetical protein -
  EQB41_RS05670 pdrM 1042106..1043467 (+) 1362 WP_127820781.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  EQB41_RS05675 - 1043621..1044589 (+) 969 WP_000105362.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17870.30 Da        Isoelectric Point: 4.2287

>NTDB_id=993653 EQB41_RS05655 WP_001135782.1 1040076..1040540(+) (mutX) [Streptococcus pneumoniae strain 4496 isolate 4496]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAVREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGMLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=993653 EQB41_RS05655 WP_001135782.1 1040076..1040540(+) (mutX) [Streptococcus pneumoniae strain 4496 isolate 4496]
ATGCCTCAGTTAGCGACGATTTGTTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGTACGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGTGACTTGATTGACTGCAATGAGGGGATGCTAGAATGGGTTCC
CTATGATGAGGTTTTGAGCAAGCCGACCTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P59659

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

100

100

1