Detailed information NTG0099362

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: QMG88_RS03270
• Genome accession: NZ_AP027052
• Coordinates: 675304..678690 (-)
• Length: 1128 a.a.
• NCBI ID: WP_281828894.1
• Uniprot ID: -
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig3
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 670304..683690

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG88_RS03255 (TUMSATVNIG3_06080)	-	670710..671735 (-)	1026	WP_004401926.1	ABC transporter permease	-
QMG88_RS03260 (TUMSATVNIG3_06090)	-	671738..672724 (-)	987	WP_004401928.1	ABC transporter permease	-
QMG88_RS03265 (TUMSATVNIG3_06100)	-	672880..674559 (-)	1680	WP_004401929.1	ABC transporter substrate-binding protein	-
QMG88_RS03270 (TUMSATVNIG3_06110)	chiS	675304..678690 (-)	3387	WP_281828894.1	ATP-binding protein	Regulator
QMG88_RS03275 (TUMSATVNIG3_06120)	rsmC	678931..679959 (-)	1029	WP_281828896.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
QMG88_RS03280 (TUMSATVNIG3_06130)	-	680038..681123 (-)	1086	WP_281830433.1	AI-2E family transporter	-
QMG88_RS03285 (TUMSATVNIG3_06140)	hemL	681362..682651 (-)	1290	WP_281828898.1	glutamate-1-semialdehyde 2,1-aminomutase	-
QMG88_RS03290 (TUMSATVNIG3_06150)	erpA	682851..683192 (+)	342	WP_004401935.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126969.49 Da
• Isoelectric Point: 5.5694

>NTDB_id=99362 QMG88_RS03270 WP_281828894.1 675304..678690(-) (chiS) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
MFKSNKKQKFKRLQHTLMVAFLVLSITPLTLIALFFLQSHSKDLQEQSTSHLLSVRDTKKQQLVDYFDAKESEVMGFVRS
ELAYNSGGRFYGLINAFSNLGETIEQSREYAQQRYIEGSGDQIKTSILPESDDYQGSERYRLMHKRYHRRYVDLLKRSDF
DDILLVDLDGNVVYSLNKHDNYGTNLGSGKYRDSNLGETFQAIKSLVKKQKDTPDITPIVMSDFALEGSEHIAWFAAPII
QQEYLHSYALFRLPSTKLISLFEDTAARKAIKAFLVGSDKQARVFNVTQEEIDKSSEIIDRALNGQTSVRTFINTAGESI
IAAYTSIKIQNIEWALIAERTEAEAFARIQQLEKVFVVAMLIAIILVVICSHYLSNFITSPLLKLTWSAERVSAGDLDEV
MFETRRKDEIGRLAVSFQRMQRSIREKILTIKSQNEELEAHLKVIQSQNDELQLANKLKDEFLATTSHELRTPLHGMVGI
AEALISGANGPIPANQKHQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIQAAAVNLSSSTRLVLELSQHLLGNKSIRII
NQVPMDLPLVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATVLDDKLRVQVVDTGQGIPAEQLEHIFEPLIQAGQDSSR
YRQGAGLGLSISRQLIELMGGTLYVSSQPLVGTTFSFSLPLASDTEISTSKQLGEQNHFQLPEANENSSPEDNSLPENPE
GPLIVVADDEPVNLQILDSFLRMEGYRVKTAKDGTETLELVQQEKPELLLLDVMMPGLSGYQVCEQVRLSYDLSELPVIM
LTALSQTNDRIKGFDSGANDYLTKPFNKLELASRIKAHLSASKAELRRIENDKLQAELKQRALVEANLLETQGRLLEQLE
SAPEAILCLRDDGRIRFANEAASKLFKRTQEQLKRSNGDEVIAPKYLNLSQEHFCGGIDVYIDDRREHLSADVLKLPEGS
DIQYMYIFNVGGGINATRINNLETAVEALSSYAFEGDKGKLQQLKELGGEFTRIADKVSGRGGDKTELMREILVDSMTTA
IDYWESETGQTKFSFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLNSIEFILDNCHTPGAQRDKLVSLRD
KLQKLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=99362 QMG88_RS03270 WP_281828894.1 675304..678690(-) (chiS) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
ATGTTTAAATCTAATAAAAAACAAAAATTTAAACGTCTTCAGCATACTTTGATGGTGGCATTTCTTGTCCTCAGTATTAC
GCCGCTGACTTTAATTGCTCTCTTCTTTTTGCAGTCTCATAGTAAAGATTTGCAGGAGCAGAGTACTTCTCACCTTCTTT
CAGTTCGAGATACGAAAAAACAACAACTTGTCGATTATTTCGATGCAAAAGAATCCGAAGTAATGGGTTTTGTCCGTTCC
GAACTGGCTTATAACAGTGGTGGTCGTTTTTACGGCCTTATCAATGCTTTCAGCAACTTAGGTGAAACGATTGAACAATC
GCGAGAGTATGCGCAGCAGCGTTATATTGAAGGATCTGGGGATCAGATAAAAACGTCAATTTTGCCTGAGTCTGATGATT
ACCAGGGCAGCGAACGTTATCGCTTAATGCACAAGCGTTACCATCGACGTTACGTTGATCTTTTAAAACGCAGTGATTTT
GACGACATCTTGTTGGTCGATCTGGATGGAAACGTCGTTTACTCACTCAACAAGCACGACAATTATGGTACGAATCTGGG
TTCTGGAAAGTATCGGGACAGCAACCTCGGTGAAACTTTTCAGGCAATAAAATCTCTGGTGAAAAAGCAAAAAGACACAC
CAGATATTACGCCAATTGTGATGTCGGATTTTGCACTAGAGGGCAGTGAGCACATCGCGTGGTTTGCCGCGCCCATCATC
CAGCAAGAATACCTGCACAGTTATGCTCTATTCCGTTTGCCTAGCACCAAGCTGATTTCTCTGTTTGAAGATACAGCCGC
GCGTAAAGCCATCAAGGCATTTTTGGTTGGTAGTGACAAACAGGCTCGTGTTTTTAACGTCACTCAAGAAGAAATTGACA
AAAGTAGCGAGATCATCGACCGCGCCCTTAACGGGCAAACCTCAGTCAGAACCTTTATTAATACCGCAGGCGAGAGCATT
ATTGCGGCTTACACCAGTATTAAGATCCAAAATATTGAATGGGCGTTAATTGCGGAACGAACCGAAGCTGAAGCGTTTGC
TCGGATTCAGCAGCTAGAAAAAGTATTCGTGGTGGCCATGTTGATTGCCATTATCCTCGTGGTGATCTGTTCGCATTACC
TTTCCAACTTCATTACTTCTCCGCTTTTAAAACTGACGTGGTCAGCTGAAAGGGTTTCGGCGGGTGATCTCGACGAAGTG
ATGTTTGAAACACGCCGCAAAGATGAAATTGGTCGTCTGGCGGTCAGCTTCCAGCGAATGCAGCGCTCTATCCGTGAGAA
GATCCTCACCATCAAATCACAAAATGAAGAGCTAGAAGCTCACCTGAAAGTGATTCAAAGCCAGAATGACGAGCTTCAAC
TGGCCAACAAACTGAAAGATGAATTCCTGGCGACTACCTCGCACGAGCTCCGTACACCACTGCATGGGATGGTGGGTATT
GCAGAGGCGTTGATCAGCGGAGCGAACGGACCAATACCTGCAAATCAGAAACATCAGCTCGATATCATCATTAATAGCGG
TCAACGTCTTGCAACTCTGGTTGATGATCTTCTGGACTATCACAAAATGCGCTACGGCAGCCTCGATATTCAGGCTGCCG
CCGTTAACCTCTCGTCCTCTACACGCTTGGTACTGGAACTTTCACAGCATTTGCTGGGCAACAAATCGATTCGCATCATT
AATCAGGTTCCGATGGATTTGCCTTTAGTATCCGCTGATCCGCAGCGTTTAGAACAGGTTCTCTACAACCTGATAGGTAA
TGCTATTAAGTACACCTCTGAAGGTAAAATCGTCATTTCCGCTACAGTGCTGGACGATAAACTCCGGGTTCAGGTGGTTG
ATACAGGTCAGGGGATTCCGGCTGAGCAGCTGGAGCACATTTTTGAGCCCCTCATTCAGGCGGGTCAGGACTCTAGCCGT
TACCGTCAGGGGGCGGGATTAGGCTTATCTATCAGCCGACAGTTGATCGAACTGATGGGAGGAACACTCTATGTCAGCAG
TCAACCTCTTGTTGGCACTACCTTTAGTTTCTCTTTACCGTTGGCGTCAGATACAGAGATATCAACGTCGAAGCAGCTTG
GCGAACAGAATCATTTCCAGTTGCCAGAAGCAAATGAAAACTCGTCACCAGAAGACAATTCATTGCCAGAAAACCCAGAA
GGTCCACTCATTGTGGTCGCGGATGATGAACCGGTGAACCTGCAAATTCTGGACAGCTTCCTGCGAATGGAAGGATACAG
GGTGAAAACGGCAAAAGATGGCACCGAGACCCTGGAACTGGTTCAACAGGAAAAGCCAGAACTGCTGCTATTAGACGTGA
TGATGCCAGGATTAAGTGGCTATCAGGTTTGTGAGCAGGTTCGTCTGAGTTATGACTTATCTGAGCTTCCGGTCATTATG
CTTACCGCGCTAAGCCAGACCAACGACCGAATCAAAGGGTTCGACAGCGGGGCAAATGACTATTTAACGAAGCCATTCAA
CAAACTTGAGCTGGCTTCTCGAATCAAAGCTCATCTCTCAGCAAGTAAGGCGGAACTTCGTCGAATTGAAAACGACAAGC
TTCAGGCAGAGCTTAAGCAAAGAGCACTAGTAGAAGCAAACCTGCTGGAAACACAAGGCAGATTGCTAGAACAGCTTGAA
TCGGCACCTGAAGCCATTCTGTGCCTTAGGGACGATGGCAGAATACGGTTTGCAAACGAGGCGGCATCTAAGCTATTTAA
ACGAACTCAGGAGCAGCTCAAACGTTCAAACGGTGACGAAGTCATCGCACCGAAATACCTCAACCTATCTCAGGAACACT
TCTGCGGCGGAATTGACGTCTACATTGACGACAGGCGTGAACACCTTTCAGCGGATGTATTGAAGCTGCCAGAAGGCTCT
GACATCCAGTATATGTATATATTCAATGTAGGCGGAGGCATTAACGCAACCCGCATTAATAATCTGGAAACCGCAGTTGA
AGCCCTGTCCAGCTATGCGTTTGAAGGAGACAAAGGCAAACTGCAACAGCTTAAAGAACTGGGTGGTGAGTTTACGCGAA
TCGCAGATAAAGTGTCTGGTCGTGGTGGAGACAAGACAGAGCTCATGAGAGAGATTCTGGTTGATTCAATGACAACTGCG
ATTGACTACTGGGAATCGGAAACGGGACAAACCAAATTCTCTTTCGCAGAGCAGAGTGGCTTATGGCGCGTTTACCTTGA
TCGCAGCACGCTGCAAACTAGAACACTGGACAAATACCTTCGTGTTGAAACTCTGCCAAAAACTCCACGCTGGCGGACGG
TATTGAACTCTATCGAGTTTATTCTGGATAACTGCCATACGCCTGGCGCACAGCGTGACAAACTGGTTAGCCTGAGGGAT
AAGTTGCAAAAACTCCTTACCTCATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• Response regulator receiver domain (Response_reg) (724-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (374-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	71.656	100	0.717