Detailed information NTG0099349

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QMG91_RS16960
• Genome accession: NZ_AP027049
• Coordinates: 3705297..3706301 (+)
• Length: 334 a.a.
• NCBI ID: WP_004405365.1
• Uniprot ID: A0AAV2VU79
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3700297..3711301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG91_RS16940 (TUMSATVNIG2_32890)	metJ	3700368..3700688 (+)	321	WP_004405361.1	met regulon transcriptional regulator MetJ	-
QMG91_RS16945 (TUMSATVNIG2_32900)	-	3700792..3702051 (-)	1260	WP_045963009.1	malic enzyme-like NAD(P)-binding protein	-
QMG91_RS16950 (TUMSATVNIG2_32910)	rpmE	3702321..3702539 (-)	219	WP_004405363.1	50S ribosomal protein L31	-
QMG91_RS16955 (TUMSATVNIG2_32920)	priA	3702843..3705044 (+)	2202	WP_281827797.1	primosomal protein N'	-
QMG91_RS16960 (TUMSATVNIG2_32930)	cytR	3705297..3706301 (+)	1005	WP_004405365.1	DNA-binding transcriptional regulator CytR	Regulator
QMG91_RS16965 (TUMSATVNIG2_32940)	-	3706428..3706964 (+)	537	WP_022551984.1	SPOR domain-containing protein	-
QMG91_RS16970 (TUMSATVNIG2_32950)	hslV	3707084..3707623 (+)	540	WP_022591191.1	ATP-dependent protease subunit HslV	-
QMG91_RS16975 (TUMSATVNIG2_32960)	hslU	3707634..3708965 (+)	1332	WP_022591190.1	HslU--HslV peptidase ATPase subunit	-
QMG91_RS16980 (TUMSATVNIG2_32970)	-	3709092..3710009 (+)	918	WP_281827802.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QMG91_RS16985 (TUMSATVNIG2_32980)	rraA	3710088..3710618 (+)	531	WP_281827804.1	ribonuclease E activity regulator RraA	-
QMG91_RS16990 (TUMSATVNIG2_32990)	zapB	3710791..3711033 (-)	243	WP_004405374.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36408.85 Da
• Isoelectric Point: 6.0502

>NTDB_id=99349 QMG91_RS16960 WP_004405365.1 3705297..3706301(+) (cytR) [Vibrio nigripulchritudo strain TUMSAT-V.nig2]
MATMKDVAQLAGVSTATVSRALMNPEKVSSTTRKRVESAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDSYFTEIIRG
IEDVAVENGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTHLPFDVSKPEQKNLPPLVMACEFAPELELPTVHIDN
LTSSFEAVNYLTQMGHSKIAQISGPDDAALCQFRNQGYQQALRRAGITMNPTYKEMGDFTFESGQKAIAKLLALPEPPTA
VFCHNDAMAIGAIKGAKAAGLKVPQDLSVVGFDDIQFAEFCDPPLTTITQPRYEIGRQAMLMLLEILKGRDVHAGSRLLE
TELKIRDSAAPPRS

Nucleotide

• Length: 1005 bp

>NTDB_id=99349 QMG91_RS16960 WP_004405365.1 3705297..3706301(+) (cytR) [Vibrio nigripulchritudo strain TUMSAT-V.nig2]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGAGTTTCAACTGCAACGGTATCGAGGGCTTTGATGAATCCTGAGAA
GGTTTCGTCGACGACACGTAAACGTGTGGAAAGCGCCGTTTTGGAAGCTGGTTATTCGCCGAATTCACTGGCAAGAAACT
TACGACGTAATGAATCCAAAACTATCGTTGCAATCGTCCCTGACATTTGCGACTCCTACTTTACAGAGATCATTCGCGGC
ATTGAGGATGTAGCCGTGGAAAACGGGTATCTCGTATTGTTAGGAGACAGCGGTCAGCAGAAGAAACGAGAGAGCTCACT
GGTCAACCTGGTCTTTACCAAACAAGCAGACGGCATGTTGTTATTGGGGACACACCTGCCGTTTGATGTCAGCAAACCGG
AACAGAAGAACTTGCCACCACTGGTCATGGCTTGTGAATTCGCACCGGAACTGGAATTGCCGACAGTGCACATTGATAAC
CTAACGTCTTCGTTCGAAGCGGTGAACTACCTCACCCAAATGGGTCATTCGAAGATTGCTCAGATTTCAGGGCCTGACGA
TGCAGCATTGTGTCAGTTCCGTAACCAAGGTTATCAGCAGGCTTTACGTCGCGCTGGCATCACCATGAATCCAACCTATA
AGGAAATGGGCGATTTCACCTTTGAATCAGGGCAAAAGGCAATCGCAAAACTTCTGGCACTTCCGGAACCACCAACTGCC
GTTTTCTGCCACAATGACGCCATGGCAATCGGCGCTATTAAGGGAGCAAAAGCGGCTGGATTGAAAGTACCTCAAGACCT
GTCTGTTGTCGGGTTTGATGATATTCAGTTCGCGGAGTTCTGTGATCCACCATTGACGACGATTACCCAACCTCGCTACG
AGATCGGTCGTCAGGCAATGTTGATGCTGCTTGAGATACTCAAAGGCAGAGATGTACATGCCGGATCACGTCTACTGGAA
ACAGAACTGAAAATCCGAGACAGCGCAGCGCCTCCAAGAAGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	85.843	99.401	0.853
cytR	Vibrio parahaemolyticus RIMD 2210633	83.483	99.701	0.832