Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AAHT65_RS14525 Genome accession   NZ_CP154443
Coordinates   2848252..2848827 (+) Length   191 a.a.
NCBI ID   WP_003327252.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SW     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2843252..2853827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT65_RS14495 (AAHT65_14495) dapD 2843382..2844092 (+) 711 WP_003327258.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AAHT65_RS14500 (AAHT65_14500) - 2844165..2845289 (+) 1125 WP_061670698.1 N-acetyldiaminopimelate deacetylase -
  AAHT65_RS14505 (AAHT65_14505) - 2845350..2845595 (+) 246 WP_003327256.1 YkuS family protein -
  AAHT65_RS14510 (AAHT65_14510) - 2845634..2846437 (-) 804 WP_343310434.1 mechanosensitive ion channel family protein -
  AAHT65_RS14515 (AAHT65_14515) ahpA 2846687..2847229 (+) 543 WP_003327254.1 biofilm-specific peroxidase AhpA -
  AAHT65_RS14520 (AAHT65_14520) - 2847314..2847772 (+) 459 WP_003327253.1 TlpA disulfide reductase family protein -
  AAHT65_RS14525 (AAHT65_14525) rok 2848252..2848827 (+) 576 WP_003327252.1 transcriptional regulator Rok Regulator
  AAHT65_RS14530 (AAHT65_14530) - 2848873..2849832 (-) 960 WP_343310435.1 sporulation protein -
  AAHT65_RS14535 (AAHT65_14535) - 2849976..2850560 (+) 585 WP_010788467.1 molybdenum cofactor guanylyltransferase -
  AAHT65_RS14540 (AAHT65_14540) - 2850632..2851651 (+) 1020 WP_343310436.1 MoeB/ThiF family adenylyltransferase -
  AAHT65_RS14545 (AAHT65_14545) glp 2851671..2852963 (+) 1293 WP_343310437.1 gephyrin-like molybdotransferase Glp -
  AAHT65_RS14550 (AAHT65_14550) mobB 2852924..2853448 (+) 525 WP_010788470.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21713.65 Da        Isoelectric Point: 9.8783

>NTDB_id=993449 AAHT65_RS14525 WP_003327252.1 2848252..2848827(+) (rok) [Bacillus atrophaeus strain SW]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSSAAETKKDFRPERKSESLPVLAELAAQEIRSYQPQ
QASQPQPQSISSIPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSL
IKMYPEVKKPYRGQYILEGEIASDSAENVTE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=993449 AAHT65_RS14525 WP_003327252.1 2848252..2848827(+) (rok) [Bacillus atrophaeus strain SW]
ATGTTTAATGAGAGGGAAGCTTTACGCTTGCGTTTGGAACAGTTAAATGAGGCTGAGGTTAAAGTCATCCGTGAATATCA
AATAGAGCGTGACAAAATATATGCAAAACTAAGAGAGCTTGACCGCAATGGAAGCTCAGCAGCGGAAACAAAAAAAGATT
TTCGCCCTGAAAGAAAAAGTGAGTCTCTTCCTGTGCTAGCCGAGCTTGCAGCACAAGAGATCAGAAGCTATCAGCCGCAG
CAGGCATCACAGCCGCAGCCGCAATCCATCTCTTCTATTCCGGCGGGTATTCCGGACGGAACGACAAGAAGAAGAAGAGG
AACTGCAAGACCGGGTTCAAAGGCAGCAAAGCTTCGTGAAGCGGCAATCAAAACATTAAAACGCCATAACGCAGCGATCA
AAAGCTCCGAACTTCAAAAGGAAATTGAGAAGGAAAGCGGGCTTGAAATCCCTAATATGACAACGTTTATGCAAAGTTTA
ATTAAAATGTATCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGCGAAATCGCTTCAGACTCTGCTGA
AAATGTGACTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.598

100

0.88

Multiple sequence alignment