Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AAHT65_RS14420 Genome accession   NZ_CP154443
Coordinates   2830974..2831438 (-) Length   154 a.a.
NCBI ID   WP_003327274.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SW     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2825974..2836438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT65_RS14400 (AAHT65_14400) - 2826422..2828242 (+) 1821 WP_343310426.1 PAS domain-containing protein -
  AAHT65_RS14405 (AAHT65_14405) - 2828265..2829434 (-) 1170 WP_088117074.1 aminotransferase A -
  AAHT65_RS14410 (AAHT65_14410) - 2829640..2829801 (-) 162 WP_003327276.1 hypothetical protein -
  AAHT65_RS14415 (AAHT65_14415) cheV 2830010..2830921 (+) 912 WP_343310427.1 chemotaxis protein CheV -
  AAHT65_RS14420 (AAHT65_14420) kre 2830974..2831438 (-) 465 WP_003327274.1 YkyB family protein Regulator
  AAHT65_RS14425 (AAHT65_14425) - 2831561..2832856 (-) 1296 WP_343310428.1 MFS transporter -
  AAHT65_RS14430 (AAHT65_14430) - 2832932..2833429 (-) 498 WP_087941879.1 L,D-transpeptidase family protein -
  AAHT65_RS14435 (AAHT65_14435) - 2833565..2834425 (-) 861 WP_343310429.1 metallophosphoesterase -
  AAHT65_RS14440 (AAHT65_14440) fadH 2834572..2835336 (+) 765 WP_003327269.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17942.68 Da        Isoelectric Point: 10.4207

>NTDB_id=993448 AAHT65_RS14420 WP_003327274.1 2830974..2831438(-) (kre) [Bacillus atrophaeus strain SW]
MDDHAYTKDLRPTIENLSKAVYTVNRHAKTAPNPKYLYTLKKRALQKLVKEGKGKKVGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKNLLQDYVGMKEKPFVTNRQQPTYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=993448 AAHT65_RS14420 WP_003327274.1 2830974..2831438(-) (kre) [Bacillus atrophaeus strain SW]
ATGGACGACCATGCATATACGAAAGATCTGCGGCCAACCATCGAAAATCTTTCAAAAGCTGTCTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATACTTTGAAAAAACGGGCTTTACAAAAGCTGGTGAAAGAAGGTAAAG
GAAAGAAAGTAGGGCTTCATTTTTCAAAAAATCCAAGGTTTAGCCAACAGCAATCGGACGTGCTCATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCGAACACCTTCCGCATTTAGGTACGCTAAATCAATCGTACCGGAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAAAACCTTTTGCAAGATTATGTCGGCATGAAAGAAAAACCGTTTGTCA
CAAATCGGCAGCAGCCAACTTACCATAAACCTGTTTTCAAAAAGCTTGGAGAAAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

94.156

100

0.942

Multiple sequence alignment