Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAHT65_RS12945 Genome accession   NZ_CP154443
Coordinates   2571678..2571869 (+) Length   63 a.a.
NCBI ID   WP_010788228.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SW     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2566678..2576869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT65_RS12915 (AAHT65_12915) argF 2567520..2568473 (+) 954 WP_343310332.1 ornithine carbamoyltransferase -
  AAHT65_RS12920 (AAHT65_12920) - 2568572..2568751 (+) 180 WP_003327605.1 YjzC family protein -
  AAHT65_RS12925 (AAHT65_12925) - 2568780..2568968 (-) 189 WP_003327604.1 YjzD family protein -
  AAHT65_RS12930 (AAHT65_12930) - 2569228..2569962 (+) 735 WP_063637420.1 hypothetical protein -
  AAHT65_RS12935 (AAHT65_12935) - 2570045..2570620 (+) 576 WP_327854126.1 hypothetical protein -
  AAHT65_RS12940 (AAHT65_12940) med 2570710..2571663 (+) 954 WP_010788227.1 BMP family ABC transporter substrate-binding protein Regulator
  AAHT65_RS12945 (AAHT65_12945) comZ 2571678..2571869 (+) 192 WP_010788228.1 ComZ family protein Regulator
  AAHT65_RS12950 (AAHT65_12950) - 2571899..2572126 (-) 228 WP_003327598.1 hypothetical protein -
  AAHT65_RS12955 (AAHT65_12955) fabH 2572298..2573236 (+) 939 WP_003327597.1 beta-ketoacyl-ACP synthase III -
  AAHT65_RS12960 (AAHT65_12960) fabF 2573258..2574496 (+) 1239 WP_094231800.1 beta-ketoacyl-ACP synthase II -
  AAHT65_RS12965 (AAHT65_12965) - 2574574..2575359 (+) 786 WP_088116920.1 DUF2268 domain-containing protein -
  AAHT65_RS12970 (AAHT65_12970) - 2575551..2576537 (+) 987 WP_010788232.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7112.08 Da        Isoelectric Point: 4.2564

>NTDB_id=993439 AAHT65_RS12945 WP_010788228.1 2571678..2571869(+) (comZ) [Bacillus atrophaeus strain SW]
MQHEKSLEFLQIAMKYLPEAKAELEKSGIELSAESIQPFMNLFSTVMAEAYELGKSDAKSENE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=993439 AAHT65_RS12945 WP_010788228.1 2571678..2571869(+) (comZ) [Bacillus atrophaeus strain SW]
ATGCAGCATGAAAAATCACTTGAATTTTTGCAAATCGCGATGAAATATTTGCCGGAAGCAAAAGCGGAGCTGGAAAAATC
GGGGATCGAGCTATCTGCCGAGTCCATACAGCCATTTATGAATCTGTTTTCAACGGTGATGGCGGAAGCTTACGAGCTTG
GCAAGTCCGACGCAAAATCAGAAAATGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

90.476

100

0.905

Multiple sequence alignment