Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AAHT65_RS11420 Genome accession   NZ_CP154443
Coordinates   2280372..2281163 (+) Length   263 a.a.
NCBI ID   WP_004430590.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SW     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2275372..2286163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT65_RS11390 (AAHT65_11390) - 2276216..2277229 (+) 1014 WP_277714808.1 iron ABC transporter permease -
  AAHT65_RS11395 (AAHT65_11395) - 2277347..2278228 (+) 882 WP_063638875.1 PhzF family phenazine biosynthesis isomerase -
  AAHT65_RS11400 (AAHT65_11400) - 2278309..2278893 (+) 585 WP_061573406.1 nitroreductase -
  AAHT65_RS11405 (AAHT65_11405) - 2278932..2279123 (-) 192 WP_004430587.1 YfhD family protein -
  AAHT65_RS11410 (AAHT65_11410) - 2279201..2279311 (-) 111 WP_003223230.1 YfhE family protein -
  AAHT65_RS11415 (AAHT65_11415) - 2279370..2280281 (-) 912 WP_327854321.1 TIGR01777 family oxidoreductase -
  AAHT65_RS11420 (AAHT65_11420) recX 2280372..2281163 (+) 792 WP_004430590.1 recombination regulator RecX Regulator
  AAHT65_RS11425 (AAHT65_11425) - 2281171..2281497 (+) 327 WP_063638873.1 YfhH family protein -
  AAHT65_RS11430 (AAHT65_11430) - 2281632..2282831 (+) 1200 WP_343310257.1 MFS transporter -
  AAHT65_RS11435 (AAHT65_11435) - 2282872..2283024 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  AAHT65_RS11440 (AAHT65_11440) - 2283142..2283411 (+) 270 WP_004430597.1 YfhJ family protein -
  AAHT65_RS11445 (AAHT65_11445) - 2283539..2284075 (+) 537 WP_010788007.1 SH3 domain-containing protein -
  AAHT65_RS11450 (AAHT65_11450) - 2284249..2284596 (+) 348 WP_010788008.1 SdpI family protein -
  AAHT65_RS11455 (AAHT65_11455) - 2284583..2285449 (+) 867 WP_106273468.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30952.20 Da        Isoelectric Point: 7.4549

>NTDB_id=993430 AAHT65_RS11420 WP_004430590.1 2280372..2281163(+) (recX) [Bacillus atrophaeus strain SW]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLKKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKETLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=993430 AAHT65_RS11420 WP_004430590.1 2280372..2281163(+) (recX) [Bacillus atrophaeus strain SW]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTCGTCAAATTCGACCTGAAAAAAGGAAAAGAACTCGACGACCTTGATATCGTTGAAATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGGGCGCTTGAATTTTTATCATACCGGATGCGCTCAACAAAAGAGGTA
ACGGACCATTTAAAAAAGAAAGAAATATCTGATCCGGCCATTACAGAAATCATCCATAAGCTGAATGATTATCGCTATCT
GAATGATAAAGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGACGATGATACGATCAAAGAGACATTGAGCACATTTTCTTTTGAGGAACAGACAGAAGAG
GCGCTGAAGCATATTGGAAAAATCCTAAAAAAAGAAAAAAAGCTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TCTGCAGCGAAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCGTTACGGCAGCACGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGCTCCTACGAGAGCAAAATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATTGACCAATTTCTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.89

100

0.829

Multiple sequence alignment