Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAHT66_RS20010 Genome accession   NZ_CP154441
Coordinates   3859014..3859205 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus inaquosorum strain XN303     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3854014..3864205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT66_RS19985 (AAHT66_19985) appD 3854351..3855337 (-) 987 WP_202328450.1 oligopeptide ABC transporter ATP-binding protein AppD -
  AAHT66_RS19990 (AAHT66_19990) - 3855528..3856313 (-) 786 WP_087993446.1 DUF2268 domain-containing protein -
  AAHT66_RS19995 (AAHT66_19995) fabF 3856391..3857632 (-) 1242 WP_087993447.1 beta-ketoacyl-ACP synthase II -
  AAHT66_RS20000 (AAHT66_20000) fabH 3857655..3858593 (-) 939 WP_087993448.1 beta-ketoacyl-ACP synthase III -
  AAHT66_RS20005 (AAHT66_20005) - 3858757..3858984 (+) 228 WP_087993449.1 hypothetical protein -
  AAHT66_RS20010 (AAHT66_20010) comZ 3859014..3859205 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  AAHT66_RS20015 (AAHT66_20015) med 3859220..3860173 (-) 954 WP_087993451.1 transcriptional regulator Med Regulator
  AAHT66_RS20020 (AAHT66_20020) - 3860264..3860824 (-) 561 WP_087993452.1 hypothetical protein -
  AAHT66_RS20025 (AAHT66_20025) - 3860905..3861639 (-) 735 WP_202328451.1 hypothetical protein -
  AAHT66_RS20030 (AAHT66_20030) - 3861887..3862072 (+) 186 WP_087993454.1 YjzD family protein -
  AAHT66_RS20035 (AAHT66_20035) - 3862119..3862298 (-) 180 WP_087993455.1 YjzC family protein -
  AAHT66_RS20040 (AAHT66_20040) argF 3862379..3863338 (-) 960 WP_202328452.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=993385 AAHT66_RS20010 WP_003224559.1 3859014..3859205(-) (comZ) [Bacillus inaquosorum strain XN303]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=993385 AAHT66_RS20010 WP_003224559.1 3859014..3859205(-) (comZ) [Bacillus inaquosorum strain XN303]
ATGCAGCATGAAAAATCACTGGAGTTCTTGCAAATTGCCATGAAATATCTTCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCAATGGAGGCCATACAGCCGTTTATGAATCTTTTTACCACGGTAATGGCTGAAGCTTATGAGCTTG
GCAAGTCTGACGCAAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment