Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   AAHT66_RS19895 Genome accession   NZ_CP154441
Coordinates   3835576..3836727 (-) Length   383 a.a.
NCBI ID   WP_202328446.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain XN303     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3830576..3841727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT66_RS19870 (AAHT66_19870) - 3830711..3831448 (+) 738 WP_333516277.1 lytic transglycosylase domain-containing protein -
  AAHT66_RS19875 (AAHT66_19875) - 3831704..3832102 (+) 399 WP_003239269.1 thiol management oxidoreductase component -
  AAHT66_RS19880 (AAHT66_19880) spxH 3832099..3832998 (+) 900 WP_087993427.1 protease adaptor protein SpxH -
  AAHT66_RS19885 (AAHT66_19885) - 3833313..3833480 (+) 168 WP_087993428.1 hypothetical protein -
  AAHT66_RS19890 (AAHT66_19890) pepF 3833516..3835345 (-) 1830 WP_202328445.1 oligoendopeptidase F -
  AAHT66_RS19895 (AAHT66_19895) coiA 3835576..3836727 (-) 1152 WP_202328446.1 competence protein CoiA family protein Machinery gene
  AAHT66_RS19900 (AAHT66_19900) mecA 3836886..3837542 (-) 657 WP_087993430.1 adaptor protein MecA Regulator
  AAHT66_RS19905 (AAHT66_19905) - 3837509..3837634 (-) 126 WP_120698858.1 hypothetical protein -
  AAHT66_RS19910 (AAHT66_19910) - 3837819..3838475 (+) 657 WP_087993431.1 TerC family protein -
  AAHT66_RS19915 (AAHT66_19915) spx 3838518..3838913 (-) 396 WP_087993432.1 transcriptional regulator Spx -
  AAHT66_RS19920 (AAHT66_19920) - 3839094..3839672 (-) 579 WP_087993433.1 GNAT family N-acetyltransferase -
  AAHT66_RS19925 (AAHT66_19925) - 3839835..3841052 (-) 1218 WP_202328535.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44803.79 Da        Isoelectric Point: 9.8513

>NTDB_id=993381 AAHT66_RS19895 WP_202328446.1 3835576..3836727(-) (coiA) [Bacillus inaquosorum strain XN303]
MFSAVTEDGQMFHLLGAQRSQKLKRGRFFCPVCGGELDVKLGLQKAPHFAHKQNKSCSIEAEPESAYHLEGKRQLYVWLK
TQQASPVLEPYLKNINQRPDIMAKIKRRMLAVEYQCATLAQDVFQKRTEGFKQAGIIPQWIVGGSRLKRTSPSFYQLTAF
HWQFIHDHPHRELLFYCPETRFFHQLSSSIPFYTNHSFCSVQTIPIHQASAGDLFFAESKSSLRYDNWMKAIHRFRHKPH
RFISKETNRLRLLFYEKRQTPLSFLPTEVFVPVTKGAVFRSPVFVWQGFLYLFITDLGHKRAPIRFSAVLQQCKLHIHKQ
NIALRYECSEDCLSEAVKQYIDFLCKKGFLRETQKEVYMLNQPAEGGRSLQELLERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=993381 AAHT66_RS19895 WP_202328446.1 3835576..3836727(-) (coiA) [Bacillus inaquosorum strain XN303]
TTGTTTAGTGCTGTGACTGAAGATGGCCAAATGTTTCACCTTCTAGGCGCTCAGCGAAGCCAGAAATTAAAGCGGGGACG
ATTCTTCTGCCCGGTATGCGGGGGAGAGCTTGATGTAAAGCTTGGACTTCAAAAAGCGCCGCATTTCGCTCATAAACAGA
ACAAGTCCTGTTCGATAGAAGCAGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTATATGTATGGCTGAAA
ACGCAACAGGCATCTCCAGTATTAGAACCGTATCTTAAGAACATCAATCAACGACCCGACATCATGGCAAAGATCAAGAG
GCGCATGCTTGCTGTTGAGTATCAATGTGCCACTCTTGCTCAAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
CAGGGATCATTCCGCAGTGGATTGTTGGAGGCAGCCGCTTAAAAAGAACATCGCCATCCTTTTATCAGCTAACCGCTTTC
CATTGGCAGTTTATTCATGACCATCCTCACCGCGAGCTTTTATTTTATTGCCCCGAAACACGCTTTTTTCACCAGCTCAG
CTCTAGTATACCGTTTTACACCAACCATTCTTTTTGCTCCGTACAAACTATTCCTATCCACCAGGCATCTGCAGGAGATC
TCTTTTTTGCTGAATCTAAATCCTCATTGCGTTATGACAACTGGATGAAGGCTATTCATCGTTTTCGCCATAAACCCCAT
CGCTTCATCTCAAAAGAAACAAATCGCCTCAGGCTGCTGTTTTATGAGAAACGGCAGACGCCCCTTTCTTTTCTTCCGAC
TGAAGTGTTTGTCCCTGTTACAAAAGGGGCCGTTTTTAGAAGTCCTGTTTTTGTGTGGCAGGGGTTTCTTTATCTGTTTA
TAACAGATCTAGGGCATAAACGCGCGCCAATTCGCTTTTCAGCCGTTTTACAGCAGTGCAAACTGCACATTCATAAACAG
AACATTGCGCTCAGATACGAATGCAGCGAAGATTGTCTTTCTGAAGCCGTTAAACAGTACATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATATGCTGAATCAGCCTGCAGAGGGCGGACGCTCATTACAGGAACTCT
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

82.306

97.389

0.802


Multiple sequence alignment