Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AAHT66_RS18535 Genome accession   NZ_CP154441
Coordinates   3591481..3591945 (+) Length   154 a.a.
NCBI ID   WP_087991019.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain XN303     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3586481..3596945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT66_RS18515 (AAHT66_18515) fadH 3587666..3588430 (-) 765 WP_087991022.1 2,4-dienoyl-CoA reductase -
  AAHT66_RS18520 (AAHT66_18520) - 3588575..3589435 (+) 861 WP_202328615.1 metallophosphoesterase -
  AAHT66_RS18525 (AAHT66_18525) - 3589493..3589987 (+) 495 WP_087991048.1 L,D-transpeptidase family protein -
  AAHT66_RS18530 (AAHT66_18530) - 3590063..3591355 (+) 1293 WP_087991020.1 MFS transporter -
  AAHT66_RS18535 (AAHT66_18535) kre 3591481..3591945 (+) 465 WP_087991019.1 YkyB family protein Regulator
  AAHT66_RS18540 (AAHT66_18540) cheV 3591988..3592899 (-) 912 WP_087991018.1 chemotaxis protein CheV -
  AAHT66_RS18545 (AAHT66_18545) - 3593106..3593267 (+) 162 WP_087991017.1 hypothetical protein -
  AAHT66_RS18550 (AAHT66_18550) - 3593469..3594650 (+) 1182 WP_087991016.1 aminotransferase A -
  AAHT66_RS18555 (AAHT66_18555) kinA 3594660..3596480 (-) 1821 WP_253269050.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17899.69 Da        Isoelectric Point: 10.3545

>NTDB_id=993377 AAHT66_RS18535 WP_087991019.1 3591481..3591945(+) (kre) [Bacillus inaquosorum strain XN303]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=993377 AAHT66_RS18535 WP_087991019.1 3591481..3591945(+) (kre) [Bacillus inaquosorum strain XN303]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACAGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAGGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTTGTGA
CAAATCGCCAGCAGCCAGCTTATCATAAACCCGTCTTTAAAAAACTCGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment