Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AAHT66_RS12195 Genome accession   NZ_CP154441
Coordinates   2334071..2334874 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain XN303     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2329071..2339874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT66_RS12175 (AAHT66_12175) - 2329181..2330026 (+) 846 WP_087990668.1 TlyA family RNA methyltransferase -
  AAHT66_RS12180 (AAHT66_12180) argR 2330123..2330572 (+) 450 WP_087990667.1 arginine repressor ArgR -
  AAHT66_RS12185 (AAHT66_12185) recN 2330610..2332340 (+) 1731 WP_087990666.1 DNA repair protein RecN Machinery gene
  AAHT66_RS12190 (AAHT66_12190) spoIVB 2332515..2333795 (+) 1281 WP_202327226.1 SpoIVB peptidase -
  AAHT66_RS12195 (AAHT66_12195) spo0A 2334071..2334874 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  AAHT66_RS12200 (AAHT66_12200) - 2335004..2335357 (+) 354 WP_333516684.1 hypothetical protein -
  AAHT66_RS12205 (AAHT66_12205) - 2335401..2336519 (-) 1119 WP_333516566.1 NADH-dependent flavin oxidoreductase -
  AAHT66_RS12210 (AAHT66_12210) - 2336927..2337658 (+) 732 WP_087990663.1 glycerophosphodiester phosphodiesterase -
  AAHT66_RS12215 (AAHT66_12215) - 2337786..2338967 (+) 1182 WP_087990662.1 acetyl-CoA C-acetyltransferase -
  AAHT66_RS12220 (AAHT66_12220) - 2338993..2339856 (+) 864 WP_087990661.1 3-hydroxybutyryl-CoA dehydrogenase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=993369 AAHT66_RS12195 WP_003226427.1 2334071..2334874(+) (spo0A) [Bacillus inaquosorum strain XN303]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=993369 AAHT66_RS12195 WP_003226427.1 2334071..2334874(+) (spo0A) [Bacillus inaquosorum strain XN303]
GTGGAGAAAATTAAAGTTTGTGTTGCTGACGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATTGAAGGACAGGA
AGACATGGAAGTCATCGGTGTTGCTTATAATGGACAGGAATGCCTGTCGTTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTGGACGGACTTGCGGTTTTAGAGCGGCTGAGGGAATCAGATCTGAAGAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCTTCTTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTTGGACATATCCGCCAGGTCAGCGGGAATGCAAGCAGCGTGACGCATCGCGCGC
CATCATCGCAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATTACAAGCATT
ATCCATGAAATCGGCGTCCCAGCGCATATTAAAGGGTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTTCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCTAGCCGTGTAGAAA
GAGCAATCCGCCACGCGATTGAAGTCGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGCTGTTCGGTTATACAGTC
AGCATGACAAAAGCTAAGCCTACTAACAGCGAATTCATTGCGATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment