Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AAHT66_RS11945 | Genome accession | NZ_CP154441 |
| Coordinates | 2293861..2294898 (+) | Length | 345 a.a. |
| NCBI ID | WP_202327196.1 | Uniprot ID | - |
| Organism | Bacillus inaquosorum strain XN303 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2288861..2299898
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAHT66_RS11925 (AAHT66_11925) | - | 2289690..2291018 (-) | 1329 | WP_087990707.1 | hemolysin family protein | - |
| AAHT66_RS11930 (AAHT66_11930) | - | 2291162..2292115 (+) | 954 | WP_087990706.1 | magnesium transporter CorA family protein | - |
| AAHT66_RS11935 (AAHT66_11935) | - | 2292178..2292588 (+) | 411 | WP_087990705.1 | CBS domain-containing protein | - |
| AAHT66_RS11940 (AAHT66_11940) | comGA | 2292804..2293874 (+) | 1071 | WP_087990704.1 | competence protein ComGA | Machinery gene |
| AAHT66_RS11945 (AAHT66_11945) | comGB | 2293861..2294898 (+) | 1038 | WP_202327196.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AAHT66_RS11950 (AAHT66_11950) | comGC | 2294912..2295208 (+) | 297 | WP_087990702.1 | comG operon protein ComGC | Machinery gene |
| AAHT66_RS11955 (AAHT66_11955) | comGD | 2295198..2295629 (+) | 432 | WP_087990701.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AAHT66_RS11960 (AAHT66_11960) | comGE | 2295613..2295960 (+) | 348 | WP_087990700.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AAHT66_RS11965 (AAHT66_11965) | comGF | 2295962..2296369 (+) | 408 | WP_284690388.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AAHT66_RS11970 (AAHT66_11970) | comGG | 2296370..2296744 (+) | 375 | WP_202327198.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| AAHT66_RS11975 (AAHT66_11975) | - | 2296813..2296992 (+) | 180 | WP_087990697.1 | YqzE family protein | - |
| AAHT66_RS11980 (AAHT66_11980) | - | 2297036..2297365 (-) | 330 | WP_087990817.1 | YqzG/YhdC family protein | - |
| AAHT66_RS11985 (AAHT66_11985) | tapA | 2297627..2298388 (+) | 762 | WP_202327199.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AAHT66_RS11990 (AAHT66_11990) | - | 2298372..2298944 (+) | 573 | WP_087990816.1 | signal peptidase I SipW | - |
| AAHT66_RS11995 (AAHT66_11995) | tasA | 2299007..2299792 (+) | 786 | WP_087990695.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39639.96 Da Isoelectric Point: 9.4222
>NTDB_id=993360 AAHT66_RS11945 WP_202327196.1 2293861..2294898(+) (comGB) [Bacillus inaquosorum strain XN303]
MKQIRKTWPLKDQALLLKRLGEMMAGGYTLLDGLRLMELQMNKRQVADLADAVTHLREGAPFYQVLKSLSFHKEAIGICY
FAVTHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLHSIIIPQFSGIYQSMNMETSRSTDMLFACF
QHSDLMVVSAALFAAGIGLYYWLVFKKKSPVRQMLICVRIPLVGKLVRLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQS
FLPFYRCEAEQVIERLKAGESIEAAICDSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKTWPLKDQALLLKRLGEMMAGGYTLLDGLRLMELQMNKRQVADLADAVTHLREGAPFYQVLKSLSFHKEAIGICY
FAVTHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLHSIIIPQFSGIYQSMNMETSRSTDMLFACF
QHSDLMVVSAALFAAGIGLYYWLVFKKKSPVRQMLICVRIPLVGKLVRLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQS
FLPFYRCEAEQVIERLKAGESIEAAICDSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=993360 AAHT66_RS11945 WP_202327196.1 2293861..2294898(+) (comGB) [Bacillus inaquosorum strain XN303]
ATGAAACAGATTAGAAAAACTTGGCCGCTAAAGGATCAAGCCTTGTTATTAAAGCGGCTTGGTGAAATGATGGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAGCTTCAGATGAATAAGAGGCAGGTGGCCGACTTGGCTGACGCGGTCA
CTCATTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCATAGGTATTTGTTAT
TTTGCTGTAACACATGGTGAATTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATCGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTTACAGTCGCTGTCATGTTTTATATGTTACATTCCATCA
TCATTCCGCAGTTTTCCGGTATTTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTCGCTTGTTTT
CAGCATAGTGATCTGATGGTCGTTTCGGCTGCTCTTTTTGCAGCAGGTATCGGGCTTTATTATTGGTTGGTGTTTAAGAA
AAAGTCACCTGTCCGGCAAATGCTTATTTGTGTCAGGATACCTTTAGTTGGAAAACTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAATCG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAGCAAGTGATTGAACGGTTAAAAGCTGGTGAATCTATTGAAGCCGCTATTTG
TGACAGCCCTTTTTATGAAACAGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGCCTAGACAGGGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAGAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCTGCGATGATCTTAATTGTGTATTTGTCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGAAAAACTTGGCCGCTAAAGGATCAAGCCTTGTTATTAAAGCGGCTTGGTGAAATGATGGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAGCTTCAGATGAATAAGAGGCAGGTGGCCGACTTGGCTGACGCGGTCA
CTCATTTGAGGGAAGGGGCTCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCATAGGTATTTGTTAT
TTTGCTGTAACACATGGTGAATTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATCGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTTACAGTCGCTGTCATGTTTTATATGTTACATTCCATCA
TCATTCCGCAGTTTTCCGGTATTTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTCGCTTGTTTT
CAGCATAGTGATCTGATGGTCGTTTCGGCTGCTCTTTTTGCAGCAGGTATCGGGCTTTATTATTGGTTGGTGTTTAAGAA
AAAGTCACCTGTCCGGCAAATGCTTATTTGTGTCAGGATACCTTTAGTTGGAAAACTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAATCG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAGCAAGTGATTGAACGGTTAAAAGCTGGTGAATCTATTGAAGCCGCTATTTG
TGACAGCCCTTTTTATGAAACAGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGCCTAGACAGGGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAGAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCTGCGATGATCTTAATTGTGTATTTGTCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
91.022 |
93.623 |
0.852 |