Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   AAHT66_RS01240 Genome accession   NZ_CP154441
Coordinates   230163..230303 (-) Length   46 a.a.
NCBI ID   WP_013307914.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain XN303     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 225163..235303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT66_RS01235 (AAHT66_01235) - 229045..230217 (-) 1173 Protein_235 condensation domain-containing protein -
  AAHT66_RS01240 (AAHT66_01240) comS 230163..230303 (-) 141 WP_013307914.1 competence protein ComS Regulator
  AAHT66_RS01245 (AAHT66_01245) srfAB 230347..233439 (-) 3093 Protein_237 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5215.99 Da        Isoelectric Point: 8.5244

>NTDB_id=993321 AAHT66_RS01240 WP_013307914.1 230163..230303(-) (comS) [Bacillus inaquosorum strain XN303]
MNRSGKHLISSIILYPQPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=993321 AAHT66_RS01240 WP_013307914.1 230163..230303(-) (comS) [Bacillus inaquosorum strain XN303]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCAGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978


Multiple sequence alignment