Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   E0E12_RS03725 Genome accession   NZ_LR027876
Coordinates   733930..734604 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain JKD6009 isolate JKD6009     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 728930..739604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0E12_RS03695 - 729145..730212 (+) 1068 WP_000980134.1 membrane protein -
  E0E12_RS03700 - 730363..731406 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  E0E12_RS03710 - 731735..732163 (+) 429 WP_000198504.1 hypothetical protein -
  E0E12_RS03715 - 732372..732878 (-) 507 WP_000940134.1 GNAT family N-acetyltransferase -
  E0E12_RS03720 graX 732991..733914 (+) 924 WP_000802946.1 auxiliary protein GraX/ApsX -
  E0E12_RS03725 braR 733930..734604 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  E0E12_RS03730 graS 734597..735637 (+) 1041 WP_001061252.1 histidine kinase GraS/ApsS -
  E0E12_RS03735 vraF 735781..736542 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  E0E12_RS03740 vraG 736532..738421 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=993261 E0E12_RS03725 WP_001166505.1 733930..734604(+) (braR) [Staphylococcus aureus strain JKD6009 isolate JKD6009]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=993261 E0E12_RS03725 WP_001166505.1 733930..734604(+) (braR) [Staphylococcus aureus strain JKD6009 isolate JKD6009]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402