Detailed information NTG0099311

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: QMG95_RS24215
• Genome accession: NZ_AP027046
• Coordinates: 1205902..1207074 (+)
• Length: 390 a.a.
• NCBI ID: WP_004408985.1
• Uniprot ID: A0AAV2VT62
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig1
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 1200902..1212074

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG95_RS24195 (TUMSATVNIG1_47380)	ylqF	1201113..1202048 (+)	936	WP_022599423.1	ribosome biogenesis GTPase YlqF	-
QMG95_RS24200 (TUMSATVNIG1_47390)	-	1202448..1203239 (+)	792	WP_200767562.1	EAL domain-containing protein	-
QMG95_RS24205 (TUMSATVNIG1_47400)	-	1203266..1204264 (-)	999	WP_200767563.1	GTP-binding protein	-
QMG95_RS24210 (TUMSATVNIG1_47410)	-	1204717..1205679 (+)	963	WP_200767564.1	TDT family transporter	-
QMG95_RS24215 (TUMSATVNIG1_47420)	cqsA	1205902..1207074 (+)	1173	WP_004408985.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
QMG95_RS24220 (TUMSATVNIG1_47430)	-	1207248..1207520 (-)	273	WP_281882706.1	response regulator	-
QMG95_RS24225 (TUMSATVNIG1_47440)	-	1207492..1208991 (-)	1500	WP_281882708.1	hybrid sensor histidine kinase/response regulator	-
QMG95_RS24230 (TUMSATVNIG1_47450)	-	1209765..1210178 (-)	414	WP_200767565.1	DUF4440 domain-containing protein	-
QMG95_RS24235 (TUMSATVNIG1_47460)	-	1210326..1210655 (+)	330	WP_200767566.1	helix-turn-helix domain-containing protein	-
QMG95_RS24240 (TUMSATVNIG1_47470)	-	1210782..1211939 (-)	1158	WP_200767567.1	alpha/beta fold hydrolase	-

Sequence

Protein

• Length: 390 a.a.
• Molecular weight: 43206.11 Da
• Isoelectric Point: 6.1542

>NTDB_id=99311 QMG95_RS24215 WP_004408985.1 1205902..1207074(+) (cqsA) [Vibrio nigripulchritudo strain TUMSAT-V.nig1]
MSNLTAKPLPNFIENKLENYLEKNIYSRNNGKHIVQGLLPNDDSIVLRSNDYLAICNHDYIKERQISALTHAKREPIMSA
VFQDQTIEEGSFEQKFADFLGFDHCIITQSGWAANVGLLQTIADENTHIYIDFFAHMSLWHGAQNANSKIHPFLHNRPKN
LLKQIKKYGPGIVVIDSVYSTHGTVAPLKEFVEVANEQGCAIIVDESHSIGTHGPHGAGLLAELGLTDKVDFVTTSLAKT
FSYRAGAILCHHKVHECLPFISLPAIFSSGIIPYEMEALKATLELIKGSDERREDLFNKSHRLIAGLKSLDISTDSDSQI
VAIETGTEENTEKVRDFFELNGIFGAVFCSPATPKNKSVIRLSVNSDVSDSELDKVLTVCSLAKEKGLLQ

Nucleotide

• Length: 1173 bp

>NTDB_id=99311 QMG95_RS24215 WP_004408985.1 1205902..1207074(+) (cqsA) [Vibrio nigripulchritudo strain TUMSAT-V.nig1]
ATGAGTAACTTAACAGCTAAACCGCTGCCGAATTTTATTGAGAATAAACTTGAGAACTACCTCGAGAAGAACATTTACTC
ACGAAATAACGGCAAACACATCGTCCAGGGCTTGCTGCCAAACGATGATTCGATAGTACTTCGTAGTAACGACTACTTGG
CAATCTGTAATCACGATTACATTAAGGAGAGACAAATCAGTGCGCTTACCCATGCTAAGCGCGAGCCGATCATGTCGGCG
GTATTTCAGGACCAAACCATCGAAGAAGGTTCTTTCGAGCAGAAATTTGCTGATTTTCTAGGCTTTGACCACTGCATTAT
CACTCAGTCAGGCTGGGCGGCAAACGTGGGGCTTCTCCAGACCATCGCCGATGAAAACACTCACATTTACATCGACTTTT
TCGCTCATATGTCCTTGTGGCATGGTGCACAAAACGCAAACAGTAAGATCCACCCCTTCCTACACAATCGTCCTAAGAAC
TTACTGAAGCAGATAAAGAAATACGGACCCGGTATTGTGGTTATCGACTCGGTATACAGTACTCACGGAACGGTCGCACC
ATTGAAAGAATTTGTCGAAGTCGCAAATGAGCAAGGCTGCGCGATCATTGTCGACGAATCTCATTCTATTGGTACACACG
GACCACACGGAGCTGGTTTGCTGGCTGAGCTAGGGTTAACGGATAAAGTTGATTTTGTTACCACCAGCCTAGCAAAAACG
TTTTCTTACCGAGCTGGCGCTATTTTGTGCCATCACAAAGTGCACGAATGTCTGCCCTTTATCTCACTTCCTGCCATCTT
CAGTTCGGGCATCATTCCTTACGAAATGGAGGCACTCAAAGCAACGCTGGAATTGATTAAGGGAAGCGACGAAAGACGCG
AGGATTTATTCAATAAATCTCATAGACTGATTGCTGGTTTGAAGTCTTTAGATATTAGTACAGACAGCGACTCTCAGATT
GTTGCTATAGAAACGGGAACAGAGGAAAACACAGAAAAAGTTAGAGACTTTTTCGAACTTAATGGCATTTTCGGTGCGGT
TTTTTGTAGCCCGGCAACGCCAAAAAATAAGAGTGTTATTCGCCTCTCTGTAAATAGCGATGTCAGTGATTCTGAGTTAG
ACAAAGTGCTTACTGTGTGTAGCTTGGCGAAAGAAAAAGGACTCTTACAATAG

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (45-377)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	54.974	97.949	0.538