Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | AAID36_RS01615 | Genome accession | NZ_CP154372 |
| Coordinates | 344610..345170 (+) | Length | 186 a.a. |
| NCBI ID | WP_002194578.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain NCSR_106 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 339610..350170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAID36_RS01590 (AAID36_01590) | - | 341751..341881 (-) | 131 | Protein_304 | hypothetical protein | - |
| AAID36_RS01595 (AAID36_01595) | rpoZ | 341920..342198 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AAID36_RS01600 (AAID36_01600) | gmk | 342271..342900 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| AAID36_RS01605 (AAID36_01605) | ispH | 343023..343973 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AAID36_RS01610 (AAID36_01610) | fimU | 344143..344616 (+) | 474 | WP_001214060.1 | GspH/FimT family pseudopilin | Machinery gene |
| AAID36_RS01615 (AAID36_01615) | pilV | 344610..345170 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| AAID36_RS01620 (AAID36_01620) | pilW | 345171..346172 (+) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| AAID36_RS01625 (AAID36_01625) | pilX | 346169..346987 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20162.12 Da Isoelectric Point: 8.2247
>NTDB_id=993091 AAID36_RS01615 WP_002194578.1 344610..345170(+) (pilV) [Acinetobacter baumannii strain NCSR_106]
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGKTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGKTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=993091 AAID36_RS01615 WP_002194578.1 344610..345170(+) (pilV) [Acinetobacter baumannii strain NCSR_106]
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGTTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCCTCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTTGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAAAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGTTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCCTCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTTGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAAAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| pilV | Acinetobacter baylyi ADP1 |
41.398 |
100 |
0.414 |