Detailed information NTG0099304

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QMG95_RS17390
• Genome accession: NZ_AP027045
• Coordinates: 3767652..3768656 (+)
• Length: 334 a.a.
• NCBI ID: WP_004405365.1
• Uniprot ID: A0AAV2VU79
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3762652..3773656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG95_RS17370 (TUMSATVNIG1_33860)	metJ	3762722..3763042 (+)	321	WP_004405361.1	met regulon transcriptional regulator MetJ	-
QMG95_RS17375 (TUMSATVNIG1_33870)	-	3763146..3764405 (-)	1260	WP_004405362.1	malic enzyme-like NAD(P)-binding protein	-
QMG95_RS17380 (TUMSATVNIG1_33880)	rpmE	3764675..3764893 (-)	219	WP_004405363.1	50S ribosomal protein L31	-
QMG95_RS17385 (TUMSATVNIG1_33890)	priA	3765197..3767398 (+)	2202	WP_200766257.1	primosomal protein N'	-
QMG95_RS17390 (TUMSATVNIG1_33900)	cytR	3767652..3768656 (+)	1005	WP_004405365.1	DNA-binding transcriptional regulator CytR	Regulator
QMG95_RS17395 (TUMSATVNIG1_33910)	-	3768783..3769319 (+)	537	WP_022551984.1	SPOR domain-containing protein	-
QMG95_RS17400 (TUMSATVNIG1_33920)	hslV	3769439..3769978 (+)	540	WP_022591191.1	ATP-dependent protease subunit HslV	-
QMG95_RS17405 (TUMSATVNIG1_33930)	hslU	3769989..3771320 (+)	1332	WP_022591190.1	HslU--HslV peptidase ATPase subunit	-
QMG95_RS17410 (TUMSATVNIG1_33940)	-	3771447..3772364 (+)	918	WP_200766258.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QMG95_RS17415 (TUMSATVNIG1_33950)	rraA	3772443..3772973 (+)	531	WP_022612821.1	ribonuclease E activity regulator RraA	-
QMG95_RS17420 (TUMSATVNIG1_33960)	zapB	3773146..3773388 (-)	243	WP_004405374.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36408.85 Da
• Isoelectric Point: 6.0502

>NTDB_id=99304 QMG95_RS17390 WP_004405365.1 3767652..3768656(+) (cytR) [Vibrio nigripulchritudo strain TUMSAT-V.nig1]
MATMKDVAQLAGVSTATVSRALMNPEKVSSTTRKRVESAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDSYFTEIIRG
IEDVAVENGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTHLPFDVSKPEQKNLPPLVMACEFAPELELPTVHIDN
LTSSFEAVNYLTQMGHSKIAQISGPDDAALCQFRNQGYQQALRRAGITMNPTYKEMGDFTFESGQKAIAKLLALPEPPTA
VFCHNDAMAIGAIKGAKAAGLKVPQDLSVVGFDDIQFAEFCDPPLTTITQPRYEIGRQAMLMLLEILKGRDVHAGSRLLE
TELKIRDSAAPPRS

Nucleotide

• Length: 1005 bp

>NTDB_id=99304 QMG95_RS17390 WP_004405365.1 3767652..3768656(+) (cytR) [Vibrio nigripulchritudo strain TUMSAT-V.nig1]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGAGTTTCAACTGCAACGGTATCGAGGGCTTTGATGAATCCTGAGAA
GGTTTCGTCGACGACACGTAAACGTGTGGAAAGCGCCGTTTTGGAAGCTGGTTATTCGCCGAATTCACTGGCAAGAAACT
TACGACGTAATGAATCCAAAACTATCGTTGCAATCGTCCCTGACATTTGCGACTCCTACTTTACAGAGATCATTCGCGGC
ATTGAGGATGTGGCCGTGGAAAACGGGTATCTCGTATTGTTAGGAGACAGCGGTCAGCAGAAGAAACGAGAGAGCTCACT
GGTCAACCTGGTCTTTACCAAACAAGCAGACGGCATGTTGTTATTGGGGACACACCTGCCGTTTGATGTCAGCAAACCGG
AACAGAAAAACTTGCCACCACTGGTCATGGCTTGTGAATTCGCGCCGGAACTGGAATTGCCGACAGTGCACATTGATAAC
CTAACGTCTTCGTTCGAAGCGGTGAACTATCTCACCCAGATGGGTCATTCGAAGATTGCTCAGATTTCAGGGCCTGACGA
TGCAGCATTGTGTCAGTTTCGTAACCAAGGTTATCAGCAGGCTTTACGTCGCGCTGGCATCACCATGAATCCAACATACA
AAGAAATGGGCGATTTCACCTTTGAATCAGGGCAAAAGGCAATCGCAAAACTTCTGGCACTTCCGGAACCACCAACTGCC
GTTTTCTGCCACAATGACGCCATGGCAATCGGCGCTATTAAGGGAGCAAAAGCGGCTGGATTGAAAGTACCTCAAGACCT
GTCTGTTGTCGGGTTTGATGATATTCAGTTCGCGGAGTTCTGTGATCCACCATTGACGACGATTACCCAACCTCGCTATG
AGATTGGTCGTCAGGCAATGCTGATGCTGCTTGAGATACTCAAAGGCAGAGATGTACATGCCGGATCACGTCTACTGGAA
ACAGAACTGAAAATCCGAGACAGCGCAGCGCCTCCAAGAAGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	85.843	99.401	0.853
cytR	Vibrio parahaemolyticus RIMD 2210633	83.483	99.701	0.832