Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AAHF05_RS07500 Genome accession   NZ_CP154353
Coordinates   1564839..1565465 (+) Length   208 a.a.
NCBI ID   WP_028019211.1    Uniprot ID   -
Organism   Enterobacter adelaidei strain ECC3473     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1559839..1570465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHF05_RS07480 (AAHF05_07470) - 1560240..1562000 (-) 1761 WP_129324413.1 Lon protease family protein -
  AAHF05_RS07485 (AAHF05_07475) matP 1562186..1562638 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  AAHF05_RS07490 (AAHF05_07480) ompA 1562702..1563757 (-) 1056 WP_108090330.1 porin OmpA -
  AAHF05_RS07495 (AAHF05_07485) sulA 1564113..1564622 (-) 510 WP_028019212.1 SOS-induced cell division inhibitor SulA -
  AAHF05_RS07500 (AAHF05_07490) sxy/tfoX 1564839..1565465 (+) 627 WP_028019211.1 TfoX/Sxy family DNA transformation protein Regulator
  AAHF05_RS07505 (AAHF05_07495) yccS 1565422..1567584 (-) 2163 WP_028019210.1 YccS family putative transporter -
  AAHF05_RS07510 (AAHF05_07500) - 1567604..1568050 (-) 447 WP_023335159.1 YccF domain-containing protein -
  AAHF05_RS07515 (AAHF05_07505) helD 1568174..1570228 (+) 2055 WP_129324414.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23905.48 Da        Isoelectric Point: 9.4993

>NTDB_id=993034 AAHF05_RS07500 WP_028019211.1 1564839..1565465(+) (sxy/tfoX) [Enterobacter adelaidei strain ECC3473]
MKKISYERIYKSQEYLSPLGDIQHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALRAARKERSQRHQRNRLKDLPNLTFQLEVLLFEAGITDEETLRTLGAKASWLKMRARN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=993034 AAHF05_RS07500 WP_028019211.1 1564839..1565465(+) (sxy/tfoX) [Enterobacter adelaidei strain ECC3473]
ATGAAAAAGATATCTTATGAACGGATCTATAAATCCCAAGAATATCTGTCTCCGCTGGGGGACATTCAACATCGGGCACT
GTTCGGGGGCTATACCCTGGCAGTGGATGATGCAGTCTTTGCCATGGTGTCAGAGGGAGAACTCTACCTCCGCGCCTGTG
AGGAAAGTGCGAAATACTGTGTAAAGAATGCCGCCTCGTTTTTGACACTCATGAAACGGGGGCGTCCGGTGCTTCTGAAC
TATTATCGCGTGGATGACGGATTGTGGCAGGACAGAGAGCGGTTGCTTCAGCTCTCCTCGTTCGCACTGAGAGCGGCAAG
AAAAGAGCGCTCTCAGCGTCATCAACGAAACCGGCTTAAGGATCTCCCGAACCTGACGTTTCAGCTTGAAGTCTTGCTTT
TTGAAGCGGGTATTACCGATGAAGAAACGCTTCGGACGCTTGGTGCGAAAGCGAGCTGGCTGAAGATGCGGGCAAGAAAT
AAAGCACTCAGTATTAAAGTGCTTTTCGCGCTGGAAGGTGCCATTGAGGGACTTCATGAAGCGGCACTCCCGGCGGGAAT
ACGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577

Multiple sequence alignment