Detailed information NTG0992851

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAIA71_RS16565
• Genome accession: NZ_CP154266
• Coordinates: 3527672..3528679 (+)
• Length: 335 a.a.
• NCBI ID: WP_005450580.1
• Uniprot ID: K5TI37
• Organism: Vibrio harveyi strain N8T11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3522672..3533679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAIA71_RS16540 (AAIA71_16540)	rplD	3522714..3523316 (-)	603	WP_005435074.1	50S ribosomal protein L4	-
AAIA71_RS16545 (AAIA71_16545)	rplC	3523334..3523963 (-)	630	WP_005435072.1	50S ribosomal protein L3	-
AAIA71_RS16550 (AAIA71_16550)	rpsJ	3523978..3524289 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
AAIA71_RS16555 (AAIA71_16555)	rpmE	3524746..3524967 (-)	222	WP_005450576.1	50S ribosomal protein L31	-
AAIA71_RS16560 (AAIA71_16560)	priA	3525264..3527465 (+)	2202	WP_017190030.1	primosomal protein N'	-
AAIA71_RS16565 (AAIA71_16565)	cytR	3527672..3528679 (+)	1008	WP_005450580.1	DNA-binding transcriptional regulator CytR	Regulator
AAIA71_RS16570 (AAIA71_16570)	-	3528845..3529390 (+)	546	WP_005450581.1	SPOR domain-containing protein	-
AAIA71_RS16575 (AAIA71_16575)	hslV	3529711..3530262 (+)	552	WP_009698878.1	ATP-dependent protease subunit HslV	-
AAIA71_RS16580 (AAIA71_16580)	hslU	3530292..3531623 (+)	1332	WP_009698879.1	HslU--HslV peptidase ATPase subunit	-
AAIA71_RS16585 (AAIA71_16585)	-	3532049..3532273 (-)	225	WP_017190028.1	hypothetical protein	-
AAIA71_RS16590 (AAIA71_16590)	radC	3532677..3533150 (+)	474	WP_017190027.1	DNA repair protein RadC	-
AAIA71_RS16595 (AAIA71_16595)	-	3533147..3533578 (+)	432	WP_026000310.1	DUF2787 domain-containing protein	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36918.48 Da
• Isoelectric Point: 5.9796

>NTDB_id=992851 AAIA71_RS16565 WP_005450580.1 3527672..3528679(+) (cytR) [Vibrio harveyi strain N8T11]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKEEQYSIVADFSFEGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=992851 AAIA71_RS16565 WP_005450580.1 3527672..3528679(+) (cytR) [Vibrio harveyi strain N8T11]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCTACGGTATCGCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCATCAACAAGAAAGAGAGTGGAAGATGCCGTACTTGAAGCTGGTTATTCACCGAATTCATTAGCTCGTAATT
TACGTAGAAATGAATCAAAGACCATTGTCACTATCGTACCGGACATATGCGATCCGTATTTCTCTGAAATCATTCGCGGT
ATCGAAGATGCAGCAATGGAACACGGTTACCTAGTTCTTCTCGGCGATAGCGGTCAGCAGAAAAAGCGCGAAAGCTCATT
CGTAAACTTAGTATTCACCAAGCAAGCTGATGGCATGTTACTACTGGGCACCGACTTACCATTCGATGTCAGCAAGCCAG
AGCAGAAAAACCTACCACCAATGGTCATGGCGTGCGAATTCGCTCCTGAGCTGGAACTACCAACGGTGCATATCGATAAC
TTGACCTCTGCATTTGAAGCCGTGAACTACCTGACGCAACTTGGTCACAAGCGTATTGCTCAGATCTCTGGTCCAGATAC
TGCGGTGCTGTGCCAGTTCCGCCAACAAGGTTACCAACAAGCACTTCGCCGTGCTGGTATTAGTAAAGAAGAGCAATACA
GCATTGTGGCTGACTTCTCTTTCGAAGGTGGCGTTCAAGCCGTACGCAAACTTCTCGAACTGCCTGAACCACCAACCGCT
CTATTCTGTCACTGTGACACCATGGCGATTGGTGCTATTCAAGAGGCGAAACGTCTTGGTCTGCGTATTCCGCAGGATTT
ATCGGTTGTCGGCTTTGATGATATTCAATTCGCGCAATATTGCGATCCACCGTTAACCACCATCTCTCAACCACGTTATG
AGATTGGTCGCCAAGCAATGCTAATGATGCTAGAGCTACTGAAAGGTCACGACGTGCACTCAGGCTCTCGCTTGCTTGAA
ACTAAATTAGTTGTGCGTGGTAGTGCAGCGCCACCACCTTTGCGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: K5TI37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	96.386	99.104	0.955
cytR	Vibrio cholerae C6706	90.663	99.104	0.899