Detailed information NTG0992839

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: EC1639_RS23545
• Genome accession: NZ_LR025101
• Coordinates: 4862592..4863575 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli isolate EC-1639
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4857592..4868575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EC1639_RS23500 (EC1639_04693)	-	4858258..4858365 (-)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-
EC1639_RS23510 (EC1639_04695)	-	4858741..4858848 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
EC1639_RS23520 (EC1639_04697)	-	4859224..4859331 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
EC1639_RS23530 (EC1639_04699)	-	4859707..4859814 (-)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
EC1639_RS23535 (EC1639_04701)	yhjV	4860290..4861561 (+)	1272	WP_001328774.1	aromatic amino acid transport family protein	-
EC1639_RS23540 (EC1639_04702)	dppF	4861591..4862595 (-)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
EC1639_RS23545 (EC1639_04703)	amiE	4862592..4863575 (-)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
EC1639_RS23550 (EC1639_04704)	dppC	4863586..4864488 (-)	903	WP_000084667.1	dipeptide ABC transporter permease DppC	-
EC1639_RS23555 (EC1639_04705)	dppB	4864498..4865517 (-)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
EC1639_RS23565 (EC1639_04706)	dppA	4865824..4867431 (-)	1608	WP_001222875.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=992839 EC1639_RS23545 WP_001196487.1 4862592..4863575(-) (amiE) [Escherichia coli isolate EC-1639]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=992839 EC1639_RS23545 WP_001196487.1 4862592..4863575(-) (amiE) [Escherichia coli isolate EC-1639]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCACTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407